| 1 | #ifndef ED4_defs |
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| 2 | #define ED4_defs |
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| 3 | |
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| 4 | |
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| 5 | //needed prototype classes |
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| 6 | class ED4_root; |
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| 7 | class ED4_database; |
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| 8 | |
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| 9 | #ifndef HAVE_BOOL |
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| 10 | typedef char bool; |
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| 11 | #endif |
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| 12 | |
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| 13 | typedef const char ED4_ERROR; |
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| 14 | typedef int ED4_COORDINATE; |
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| 15 | |
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| 16 | typedef enum ad_edit_modus { |
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| 17 | AD_ALIGN, // add & remove of . possible (default) |
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| 18 | AD_NOWRITE, // no edits allowed |
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| 19 | AD_NOWRITE_IF_COMPRESSED, |
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| 20 | AD_REPLACE, // all edits (overwrite) |
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| 21 | AD_INSERT // all edits (insert) |
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| 22 | } ED4_EDITMODI; |
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| 23 | |
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| 24 | |
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| 25 | //global variables |
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| 26 | extern GBDATA *gb_main; |
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| 27 | extern ED4_root *ED4_ROOT; |
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| 28 | extern ED4_database *main_db; |
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| 29 | |
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| 30 | extern int TERMINALHEIGHT; // this variable replaces the define |
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| 31 | extern int MAXLETTERDESCENT; // Important for drawing text on the screen |
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| 32 | extern int MAXSEQUENCECHARACTERLENGTH; // greatest # of characters in a sequence string terminal |
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| 33 | extern int MAXSPECIESWIDTH; |
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| 34 | extern int MAXINFOWIDTH; |
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| 35 | extern int MAXCHARWIDTH; |
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| 36 | extern int MARGIN; // sets margin for cursor moves in characters |
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| 37 | extern long ED4_counter; |
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| 38 | extern long all_found; // nr of species which haven't been found |
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| 39 | extern long species_read; // nr of species read; important during loading |
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| 40 | extern void *not_found_message; |
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| 41 | extern long max_seq_terminal_length; // global maximum of sequence terminal length |
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| 42 | extern ED4_EDITMODI awar_edit_modus; |
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| 43 | extern long awar_edit_direction; |
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| 44 | extern bool move_cursor; //only needed for editing in consensus |
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| 45 | extern bool DRAW; |
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| 46 | extern bool last_window_reached; //only needed for refreshing all windows |
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| 47 | |
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| 48 | extern double status_add_count; //only needed for loading configuration |
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| 49 | extern double status_total_count; |
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| 50 | extern bool loading; |
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| 51 | //extern long last_used_timestamp; // time of last timed callback |
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| 52 | |
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| 53 | // globally used defines and flags |
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| 54 | |
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| 55 | #define INFINITE -1 |
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| 56 | #define SLIDER_OFFSET 5 |
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| 57 | //#define HALFCURSORWIDTH 3 |
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| 58 | |
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| 59 | // these are recommended for accessing ED4_extension: |
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| 60 | #define X_POS 0 |
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| 61 | #define Y_POS 1 |
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| 62 | #define WIDTH 0 |
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| 63 | #define HEIGHT 1 |
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| 64 | |
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| 65 | // size of some display elements: |
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| 66 | #define BRACKETWIDTH 10 |
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| 67 | #define SPACERHEIGHT 5 |
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| 68 | #define SPACERNOCONSENSUSHEIGHT 15 // height of spacer at top of group (used if consensus is hidden and group is folded) |
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| 69 | #define SEQUENCEINFOSIZE 50 |
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| 70 | #define TREETERMINALSIZE 100 |
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| 71 | |
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| 72 | #define COLUMN_STAT_ROW_HEIGHT(font_height) (2.2*(font_height)) // each row contains 2 sub-rows (plus some xtra space) |
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| 73 | #define COLUMN_STAT_ROWS 4 |
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| 74 | |
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| 75 | #define MAXCHARTABLE 256 // Maximum of Consensustable |
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| 76 | //#define MAXBASESTABLE 7 |
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| 77 | #define MAXWINDOWS 5 |
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| 78 | #define MINSPECFORSTATWIN 200 |
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| 79 | |
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| 80 | #define AWAR_EDIT_MODE "tmp/edit4/edit_mode" |
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| 81 | #define AWAR_INSERT_MODE "tmp/edit4/insert_mode" |
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| 82 | #define AWAR_EDIT_DIRECTION "tmp/edit4/edit_direction" |
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| 83 | #define AWAR_EDIT_SECURITY_LEVEL "tmp/edit4/security_level" |
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| 84 | #define AWAR_EDIT_SECURITY_LEVEL_ALIGN "tmp/edit4/security_level_align" |
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| 85 | #define AWAR_EDIT_SECURITY_LEVEL_CHANGE "tmp/edit4/security_level_change" |
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| 86 | #define AWAR_EDIT_CONFIGURATION "tmp/edit4/configuration" |
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| 87 | |
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| 88 | #define AWAR_EDIT_SEQ_POSITION "tmp/edit4/jump_to_position%d" // used to create ED4_window.awar_path_for_cursor[] |
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| 89 | #define AWAR_EDIT_ECOLI_POSITION "tmp/edit4/cursor_ref_ecoli%d" // used to create ED4_window.awar_path_for_Ecoli[] |
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| 90 | #define AWAR_EDIT_BASE_POSITION "tmp/edit4/cursor_to_basepos%d" // used to create ED4_window.awar_path_for_basePos[] |
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| 91 | #define AWAR_EDIT_IUPAC "tmp/edit4/iupac%d" // used to create ED4_window.awar_path_for_IUPAC[] |
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| 92 | #define AWAR_EDIT_HELIXNR "tmp/edit4/helixnr%d" // used to create ED4_window.awar_path_for_helixNr[] |
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| 93 | |
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| 94 | #define AWAR_FIELD_CHOSEN "tmp/edit4/field_chosen" // used for field selection box |
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| 95 | |
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| 96 | #define AWAR_EDIT_TITLE_MODE "edit4/title_mode" |
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| 97 | #define AWAR_EDIT_HELIX_SPACING "edit4/helix_spacing" |
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| 98 | |
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| 99 | #define CHARACTEROFFSET 5 // spacer-width left of text-terminal |
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| 100 | #define CONSENSUS "Consensusfunktion" |
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| 101 | |
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| 102 | #define ED4_index long |
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| 103 | |
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| 104 | inline int max(int x, int y) { return x>y ? x : y; } |
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| 105 | inline int min(int x, int y) { return x<y ? x : y; } |
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| 106 | inline int ABS(int x) { return x<0 ? -x : x; } |
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| 107 | |
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| 108 | #define ED4_SCROLL_OVERLAP 20 // 15 Pixels overlap |
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| 109 | |
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| 110 | #define ED4_G_FIRST_FONT ED4_G_STANDARD // ED4_G_SEQUENCES |
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| 111 | #define ED4_G_LAST_FONT ED4_G_HELIX |
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| 112 | |
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| 113 | typedef enum |
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| 114 | { |
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| 115 | ED4_G_STANDARD, |
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| 116 | |
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| 117 | ED4_G_SEQUENCES, |
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| 118 | ED4_G_HELIX, |
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| 119 | |
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| 120 | ED4_G_COLOR_2, |
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| 121 | ED4_G_COLOR_3, |
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| 122 | ED4_G_COLOR_4, |
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| 123 | ED4_G_COLOR_5, |
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| 124 | ED4_G_COLOR_6, |
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| 125 | ED4_G_COLOR_7, |
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| 126 | ED4_G_COLOR_8, |
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| 127 | ED4_G_COLOR_9, |
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| 128 | |
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| 129 | ED4_G_CBACK_0, // Ranges for column statitics |
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| 130 | ED4_G_CBACK_1, |
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| 131 | ED4_G_CBACK_2, |
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| 132 | ED4_G_CBACK_3, |
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| 133 | ED4_G_CBACK_4, |
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| 134 | ED4_G_CBACK_5, |
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| 135 | ED4_G_CBACK_6, |
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| 136 | ED4_G_CBACK_7, |
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| 137 | ED4_G_CBACK_8, |
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| 138 | ED4_G_CBACK_9, |
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| 139 | |
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| 140 | ED4_G_SBACK_0, // Background for search |
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| 141 | ED4_G_SBACK_1, |
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| 142 | ED4_G_SBACK_2, |
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| 143 | ED4_G_SBACK_3, |
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| 144 | ED4_G_SBACK_4, |
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| 145 | ED4_G_SBACK_5, |
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| 146 | ED4_G_SBACK_6, |
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| 147 | ED4_G_SBACK_7, |
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| 148 | ED4_G_SBACK_8, |
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| 149 | ED4_G_MBACK, // Mismatches |
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| 150 | |
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| 151 | ED4_G_CURSOR, // Color of cursor |
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| 152 | ED4_G_MARKED, // Background for marked species |
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| 153 | ED4_G_SELECTED, // Background for selected species |
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| 154 | |
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| 155 | ED4_G_DRAG // must be last |
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| 156 | } ED4_gc; |
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| 157 | |
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| 158 | typedef enum |
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| 159 | { |
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| 160 | ED4_L_NO_LEVEL = 0x0, |
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| 161 | ED4_L_ROOT = 0x1, |
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| 162 | ED4_L_DEVICE = 0x2, |
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| 163 | ED4_L_AREA = 0x4, |
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| 164 | ED4_L_MULTI_SPECIES = 0x8, |
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| 165 | ED4_L_SPECIES = 0x10, |
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| 166 | ED4_L_MULTI_SEQUENCE = 0x20, |
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| 167 | ED4_L_SEQUENCE = 0x40, |
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| 168 | ED4_L_TREE = 0x80, |
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| 169 | ED4_L_SPECIES_NAME = 0x100, |
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| 170 | ED4_L_SEQUENCE_INFO = 0x200, //evtl. aendern fuer Name-Manager und group-manager |
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| 171 | ED4_L_SEQUENCE_STRING = 0x400, |
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| 172 | ED4_L_SPACER = 0x800, |
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| 173 | ED4_L_LINE = 0x1000, |
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| 174 | ED4_L_MULTI_NAME = 0x2000, |
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| 175 | ED4_L_NAME_MANAGER = 0x4000, |
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| 176 | ED4_L_GROUP = 0x8000, |
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| 177 | ED4_L_BRACKET = 0x10000, |
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| 178 | ED4_L_PURE_TEXT = 0x20000, |
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| 179 | ED4_L_COL_STAT = 0x40000 |
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| 180 | } ED4_level; |
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| 181 | |
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| 182 | |
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| 183 | |
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| 184 | typedef enum |
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| 185 | { |
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| 186 | ED4_D_SPECIES, |
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| 187 | ED4_D_EXTENDED |
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| 188 | } ED4_datamode; |
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| 189 | |
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| 190 | |
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| 191 | typedef enum |
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| 192 | { |
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| 193 | ED4_M_NO_MOVE = 0, |
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| 194 | ED4_M_HORIZONTAL = 1, |
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| 195 | ED4_M_VERTICAL = 2, |
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| 196 | ED4_M_FREE = 4 |
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| 197 | } ED4_movemode; |
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| 198 | |
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| 199 | typedef enum |
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| 200 | { |
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| 201 | ED4_R_OK = 0, |
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| 202 | ED4_R_WARNING = 1, |
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| 203 | ED4_R_IMPOSSIBLE = 2, |
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| 204 | ED4_R_ERROR = 4, |
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| 205 | ED4_R_BREAK = 8, |
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| 206 | ED4_R_DESASTER = 16, |
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| 207 | // ED4_R_REMOVE = 32, |
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| 208 | // ED4_R_LEAVE = 64, |
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| 209 | // ED4_R_ADD = 128, |
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| 210 | // ED4_R_REMOVE_ALL = 256, |
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| 211 | ED4_R_ALL = 0x7fffffff |
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| 212 | } ED4_returncode; |
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| 213 | |
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| 214 | typedef enum |
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| 215 | { |
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| 216 | ED4_A_TOP_AREA, |
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| 217 | ED4_A_MIDDLE_AREA, |
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| 218 | ED4_A_BOTTOM_AREA, |
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| 219 | ED4_A_ERROR |
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| 220 | } ED4_AREA_LEVEL; |
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| 221 | |
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| 222 | typedef enum |
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| 223 | { |
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| 224 | ED4_B_LEFT_BUTTON = 1, |
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| 225 | ED4_B_MIDDLE_BUTTON = 2, |
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| 226 | ED4_B_RIGHT_BUTTON = 3 |
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| 227 | } ED4_mouse_buttons; |
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| 228 | |
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| 229 | typedef enum |
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| 230 | { |
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| 231 | ED4_P_NO_PROP = 0, |
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| 232 | ED4_P_IS_MANAGER = 1, |
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| 233 | ED4_P_IS_TERMINAL = 2, |
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| 234 | ED4_P_HORIZONTAL = 4, |
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| 235 | ED4_P_VERTICAL = 8, |
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| 236 | ED4_P_TMP = 16, |
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| 237 | ED4_P_SELECTABLE = 32, |
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| 238 | ED4_P_DRAGABLE = 64, |
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| 239 | ED4_P_MOVABLE = 128, |
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| 240 | ED4_P_IS_HANDLE = 256, |
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| 241 | ED4_P_CURSOR_ALLOWED = 512, |
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| 242 | // ED4_P_SCROLL_HORIZONTAL = 1024, |
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| 243 | // ED4_P_SCROLL_VERTICAL = 2048, |
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| 244 | ED4_P_IS_FOLDED = 4096, // Flag whether group is folded or not |
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| 245 | ED4_P_CONSENSUS_RELEVANT= 8192, |
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| 246 | ED4_P_ALL = 0x7fffffff |
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| 247 | } ED4_properties; |
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| 248 | |
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| 249 | typedef enum |
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| 250 | { |
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| 251 | ED4_C_UP, |
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| 252 | ED4_C_DOWN, |
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| 253 | ED4_C_LEFT, |
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| 254 | ED4_C_RIGHT, |
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| 255 | ED4_C_NONE |
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| 256 | } ED4_cursor_move; |
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| 257 | |
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| 258 | typedef enum |
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| 259 | { |
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| 260 | ED4_U_UP = 0, |
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| 261 | ED4_U_UP_DOWN |
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| 262 | } ED4_update_flag; |
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| 263 | |
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| 264 | typedef enum |
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| 265 | { |
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| 266 | ED4_B_BORDER, |
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| 267 | ED4_B_INDENT, |
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| 268 | ED4_B_BOTTOM_AREA |
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| 269 | } ED4_border_flag; |
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| 270 | |
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| 271 | typedef enum |
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| 272 | { |
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| 273 | ED4_K_ADD, |
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| 274 | ED4_K_SUB |
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| 275 | } ED4_consensus; |
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| 276 | |
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| 277 | typedef enum |
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| 278 | { |
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| 279 | ED4_A_DEFAULT, |
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| 280 | ED4_A_CONTAINER |
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| 281 | } ED4_alignment; |
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| 282 | |
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| 283 | |
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| 284 | typedef enum |
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| 285 | { |
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| 286 | ED4_D_VERTICAL, |
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| 287 | ED4_D_HORIZONTAL, |
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| 288 | ED4_D_ALL_DIRECTION, |
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| 289 | ED4_D_VERTICAL_ALL |
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| 290 | } ED4_direction; |
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| 291 | |
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| 292 | |
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| 293 | class ED4_base; |
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| 294 | class ED4_terminal; |
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| 295 | |
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| 296 | struct ED4_move_info |
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| 297 | { |
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| 298 | ED4_base *object; // object to be moved |
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| 299 | AW_pos end_x, end_y; // position to move to |
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| 300 | ED4_movemode mode; // move mode |
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| 301 | ED4_level preferred_parent; // level to move to |
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| 302 | }; |
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| 303 | |
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| 304 | struct ED4_selection_entry |
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| 305 | { |
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| 306 | AW_pos drag_off_x, drag_off_y; |
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| 307 | AW_pos drag_old_x, drag_old_y; |
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| 308 | AW_pos actual_width, actual_height; |
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| 309 | int old_event_y; |
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| 310 | ED4_terminal *object; |
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| 311 | }; |
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| 312 | |
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| 313 | |
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| 314 | |
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| 315 | struct ED4_extension // contains info about graphical properties |
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| 316 | { |
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| 317 | AW_pos position[2]; // upper left corner (pos_x, pos_y) in relation to parent |
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| 318 | // !!! WARNING: This is a hack!!! Every time you change 'position' you HAVE TO call ED4_base::touch_world_cache() !!! |
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| 319 | |
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| 320 | AW_pos size[2]; // width and height |
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| 321 | ED4_index y_folded; // remember old position of consensus when folding group |
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| 322 | }; |
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| 323 | |
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| 324 | struct ED4_scroll_picture |
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| 325 | { |
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| 326 | bool scroll; |
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| 327 | long old_x; |
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| 328 | long old_y; |
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| 329 | }; |
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| 330 | |
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| 331 | |
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| 332 | struct ED4_work_info |
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| 333 | { |
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| 334 | AW_event event; |
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| 335 | GBDATA *gb_data; |
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| 336 | char *string; // pointer to consensus; only if editing the consensus |
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| 337 | long char_position; // screen position after cursor |
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| 338 | |
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| 339 | int direction; // contains direction of editing (-1 left, +1 right ) |
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| 340 | ED4_EDITMODI mode; |
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| 341 | |
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| 342 | bool is_sequence; // ==1 -> special handling for sequences |
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| 343 | bool cannot_handle; // if TRUE than cannot edit |
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| 344 | bool center_cursor; // if true => cursor gets centered horizontally |
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| 345 | bool refresh_needed; |
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| 346 | |
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| 347 | long out_seq_position; // sequence position (after editing) |
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| 348 | |
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| 349 | char *out_string; // nur falls new malloc |
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| 350 | char *error; |
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| 351 | |
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| 352 | int repeat_count; // only for keystrokes: contains # of times key should be repeated |
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| 353 | }; |
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| 354 | |
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| 355 | |
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| 356 | struct ED4_update_info // if you add new elements, please ensure to initialize them in ED4_base::ED4_base() |
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| 357 | { |
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| 358 | unsigned int resize:1; |
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| 359 | unsigned int refresh:1; |
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| 360 | unsigned int clear_at_refresh:1; |
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| 361 | unsigned int linked_to_folding_line:1; |
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| 362 | unsigned int linked_to_scrolled_rectangle:1; |
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| 363 | unsigned int refresh_horizontal_scrolling:1; |
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| 364 | unsigned int refresh_vertical_scrolling:1; |
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| 365 | unsigned int delete_requested:1; |
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| 366 | |
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| 367 | void set_clear_at_refresh(int value) { |
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| 368 | clear_at_refresh = value; |
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| 369 | } |
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| 370 | void set_refresh(int value) { |
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| 371 | refresh = value; |
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| 372 | } |
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| 373 | void set_resize(int value) { |
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| 374 | resize = value; |
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| 375 | } |
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| 376 | }; |
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| 377 | |
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| 378 | struct ED4_coords |
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| 379 | { |
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| 380 | long top_area_x, |
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| 381 | top_area_y, |
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| 382 | top_area_height, |
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| 383 | |
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| 384 | middle_area_x, |
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| 385 | middle_area_y, |
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| 386 | |
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| 387 | window_width, //of whole window (top and middle area and ... ) |
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| 388 | window_height, //of whole window (top and middle area and ... ) |
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| 389 | |
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| 390 | window_upper_clip_point, //absolute coordinate of upper visible clipping point in middle area |
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| 391 | window_lower_clip_point, //absolute coordinate of lower visible clipping point in middle area |
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| 392 | window_left_clip_point, //absolute coordinate of left visible clipping point in top and middle area |
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| 393 | window_right_clip_point; //absolute coordinate of right visible clipping point in top and middle area |
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| 394 | |
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| 395 | void clear() { |
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| 396 | top_area_x = 0; |
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| 397 | top_area_y = 0; |
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| 398 | top_area_height = 0; |
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| 399 | |
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| 400 | middle_area_x = 0; |
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| 401 | middle_area_y = 0; |
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| 402 | |
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| 403 | window_width = 0; |
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| 404 | window_height = 0; |
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| 405 | |
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| 406 | window_upper_clip_point = 0; |
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| 407 | window_lower_clip_point = 0; |
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| 408 | window_left_clip_point = 0; |
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| 409 | window_right_clip_point = 0; |
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| 410 | } |
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| 411 | }; |
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| 412 | |
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| 413 | |
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| 414 | #endif |
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