source: tags/initial/PHYLO/PH_filter.hxx

class PH_filter {
        public:
        char    *filter;        // 0 1
        long    filter_len;
        long    real_len;       // how many 1
        long    update;
        long    *options_vector;   // options used to calculate current filter
//      float   *markerline;       // line to create filter (according to options_vector)
        char    *init(char *filter, char *zerobases, long size);
        char    *init(long size);
        
        PH_filter::PH_filter(void);
        ~PH_filter(void);
        float *calculate_column_homology(void);
};