source: tags/ms_r16q4/HELP_SOURCE/oldhelp/tree_cmp.hlp

Last change on this file was 11488, checked in by westram, 10 years ago
  • reintegrates 'tree' into 'trunk'
    • implements #417 (multifurcate tree)
    • tree display
      • adds MULTIFURC MODE
      • reordered modes (synchronizes NTREE and PARSIMONY)
    • branch analysis
      • display number of multifurcations in 'mark long branches'
      • display "in-tree-distance" and "per-species-distance"
    • added function to toggle '100%' bootstraps
    • document bug in GBT_remove_leafs (#452)
  • adds:
  • Property svn:eol-style set to native
  • Property svn:keywords set to Author Date Id Revision
File size: 1.6 KB
Line 
1#Please insert up references in the next lines (line starts with keyword UP)
2UP      arb.hlp
3UP      glossary.hlp
4UP      treeadm.hlp
5
6#Please insert subtopic references  (line starts with keyword SUB)
7#SUB    subtopic.hlp
8
9# Hypertext links in helptext can be added like this: LINK{ref.hlp|http://add|bla@domain}
10
11#************* Title of helpfile !! and start of real helpfile ********
12TITLE           Move node info
13
14OCCURRENCE      ARB_NT/Tree/Tree admin/Move Node Info
15
16DESCRIPTION     Move the internal group labels from one tree to another. If
17                the trees are different, the program will try to guess where to
18                put the inner node labels. If a node cannot be places optimal,
19                then a message is generated.
20
21                Select the (source) tree with the node labels in the left
22                selection list and the destination tree in the right selection
23                list.
24
25                If you press 'Copy info' all nodes in the destination
26                tree get deleted and the new nodes are inserted instead.
27
28                If you press 'Add info' the nodes in the destination tree
29                are renamed ('newname [was: oldname]') and non-existing nodes
30                from the source tree are inserted.
31
32                If you check 'only info containing marked species' only groups
33                containing at least one marked species are moved to the
34                destination tree.
35
36NOTES           Moving node info depends on placement of the tree root. Setting the
37                root in the destination tree similar to the root in the source tree
38                can greatly improve results of node transfer.
39
40BUGS            ARB sets the root-node of the destination tree, but often fails to
41                find the best possible node (see also LINK{http://bugs.arb-home.de/ticket/451})
42
43EXAMPLES        None
44
45WARNINGS        It's slow..
46
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