source: tags/svn.1.5.4

Name Size Rev Age Author Last Change
../
AISC 8324   10 years westram - clang-fix: explicitely pass language type to compiler when .c is …
AISC_COM 8314   10 years westram * removed AISC debug code
AISC_MKPTPS 8393   10 years westram - cppchecked (1.53)
ARB_GDE 8393   10 years westram - cppchecked (1.53)
ARBDB 8393   10 years westram - cppchecked (1.53)
AWT 8423   10 years westram * use LocallyModify for several flags
AWTC 8313   10 years westram * removed dead code (partly reverted by [8316])
AWTI 8359   10 years westram * added 'Never ask again' switch to most modal question dialogs. This …
bin 7983   10 years westram - ignore link to collect_gene_info.pl
BINDEP 8273   10 years westram - removed dead ALIV3
BUGEX 7044   11 years westram * fixed include wrappers (merges [7006] [7007]) - use gcc-style …
CONSENSUS_TREE 8313   10 years westram * removed dead code (partly reverted by [8316])
CONVERTALN 8309   10 years westram * moved much code into static scope (partly reverted by [8310])
CORE 8367   10 years westram - GBK_system error no longer gives hint to look at console window, …
DBSERVER 8423   10 years westram * use LocallyModify for several flags
DIST 8423   10 years westram * use LocallyModify for several flags
doc 6141   12 years westram * spellchecked all (phew)
EDIT4 8363   10 years westram * property file loading - missing fallback for 'Save loaded …
EISPACK 7803   10 years westram merge from dev [7716] [7732] [7733] [7734] [7735] * script to …
etc 6141   12 years westram * spellchecked all (phew)
GDE 8240   10 years westram - patch for ubuntu 11.10 oneiric / gcc 4.6.1 (thx to Kai) * dont …
GDEHELP 8205   10 years westram merge from stable_5.0 [8203] * removed molphy (protml)
GENOM 8360   10 years westram * renamed menu separator functions * removed macro AWMIMT
GENOM_IMPORT 8251   10 years westram - removed using decls from headers
GL 8313   10 years westram * removed dead code (partly reverted by [8316])
HEADERLIBS 7895   10 years westram * added arb_rnacma (correlated mutation analysis) written by Breno …
HELP_SOURCE 8393   10 years westram - cppchecked (1.53)
ISLAND_HOPPING 8309   10 years westram * moved much code into static scope (partly reverted by [8310])
lib 8056   10 years westram * fixed undefined AWAR_CANIO_BORDERSIZE in canvas_to_xfig - …
MERGE 8423   10 years westram * use LocallyModify for several flags
MULTI_PROBE 8393   10 years westram - cppchecked (1.53)
NALIGNER 8313   10 years westram * removed dead code (partly reverted by [8316])
NAMES 8309   10 years westram * moved much code into static scope (partly reverted by [8310])
NAMES_COM 8324   10 years westram - clang-fix: explicitely pass language type to compiler when .c is …
NTREE 8423   10 years westram * use LocallyModify for several flags
PARSIMONY 8393   10 years westram - cppchecked (1.53)
PERL2ARB 8312   10 years westram - corrected refs wrong since [7781]
PERL_SCRIPTS 8319   10 years westram * ignored PERL2ARB interface as referrer (to detect functions that are …
PERLTOOLS 7819   10 years westram merge from dev [7774] [7778] [7779] [7780] [7781] [7782] [7783] [7784]
PGT 8393   10 years westram - cppchecked (1.53)
PHYLO 8393   10 years westram - cppchecked (1.53)
PRIMER_DESIGN 8393   10 years westram - cppchecked (1.53)
PROBE 8313   10 years westram * removed dead code (partly reverted by [8316])
PROBE_COM 8324   10 years westram - clang-fix: explicitely pass language type to compiler when .c is …
PROBE_DESIGN 8423   10 years westram * use LocallyModify for several flags
PROBE_SET 8393   10 years westram - cppchecked (1.53)
ptpan 7935   10 years westram - removed outdated ptpan
READSEQ 7803   10 years westram merge from dev [7716] [7732] [7733] [7734] [7735] * script to …
RNA3D 8309   10 years westram * moved much code into static scope (partly reverted by [8310])
RNACMA 8322   10 years westram - clang-fix: replace auto-arrays of non-POD types by dynamic memory
SECEDIT 8360   10 years westram * renamed menu separator functions * removed macro AWMIMT
SEQ_QUALITY 8313   10 years westram * removed dead code (partly reverted by [8316])
SERVERCNTRL 8309   10 years westram * moved much code into static scope (partly reverted by [8310])
SH 8241   10 years westram - use libmotif4 - changed way to add the ARB repository to sources.lst
SL 8423   10 years westram * use LocallyModify for several flags
SOURCE_TOOLS 8360   10 years westram * renamed menu separator functions * removed macro AWMIMT
STAT 8309   10 years westram * moved much code into static scope (partly reverted by [8310])
TEMPLATES 8420   10 years westram - added LocallyModify::old_value()
TOOLS 8423   10 years westram * use LocallyModify for several flags
TREEGEN 8249   10 years westram * wrap main for untested (but testable) units - still untestable …
UNIT_TESTER 8352   10 years westram - change result expected by unit-test (according to [8351])
util 8041   10 years westram merge from dev [7990] [7991] [7992] [7993] [7994] [7995] [7996] [7998]
WETC 8249   10 years westram * wrap main for untested (but testable) units - still untestable …
WINDOW 8423   10 years westram * use LocallyModify for several flags
XML 8393   10 years westram - cppchecked (1.53)
XML_IMPORT 7811   10 years westram merge from dev [7748] [7749] [7750] * comments (C→C++ style) * …
arb_CHANGES.txt 10.4 KB 6774   11 years westram - merged changelog from stable (all changes are already in trunk)
arb_DEBUG.txt 1.2 KB 578   20 years westram * empty log message *
arb_install.sh 14.3 KB 6350   12 years westram - accept arb.tgz as file (not only as link). Needed if you install ARB …
arb_INSTALL.txt 3.7 KB 8283   10 years westram - compile on suse 12.1
arb_LICENSE.txt 10.7 KB 8205   10 years westram merge from stable_5.0 [8203] * removed molphy (protml)
arb_OS_X.txt 5.5 KB 6214   12 years westram - updated OS_X info (thx to Matt)
arb_OS_X_MacPorts.txt 370 bytes 6288   12 years westram * include ALL arb_*.txt into release tarball * renamed …
arb_README.txt 5.9 KB 8212   10 years westram merge from stable_5.0 [8207] [8210] [8211] * refer to ubuntu 10.04 …
arb_UBUNTU.txt 1.2 KB 8212   10 years westram merge from stable_5.0 [8207] [8210] [8211] * refer to ubuntu 10.04 …
arbsrc_README.txt 210 bytes 6288   12 years westram * include ALL arb_*.txt into release tarball * renamed …
arbsrc_README_gcc.txt 2.1 KB 7331   11 years westram - tested and added gcc 4.5.2
config.makefile.template 1.6 KB 7337   11 years westram * possibility to toggle the TODO-warnings via config.makefile
demo.arb 78.9 KB 7664   10 years westram * merge from dev [7509] [7510] [7511] [7514] [7517] [7520] [7524]
Doxyfile 62.2 KB 6864   11 years westram * doxygen (merges [6852] [6854] [6857] from refactor) - workaround …
Makefile 56.7 KB 8327   10 years westram - clang static analyzer working
README 717 bytes 5390   13 years westram - TAB-Ex
  • Property svn:ignore set to
    *.last_gcc
    ARB_SOURCE_DOC
    ChangeLog
    INCLUDE
    LIBLINK
    PERL5
    arb.tgz
    arbsrc.lst
    arbsrc_*.tgz
    compile.log
    config.makefile
    do_core
    TAGS
    .cdtproject
    .project
    .settings
    arbsrc.tgz
    *.bak
    arb_time.log
    latest.patch
    patches.arb
    makeloc.here
    interdiff.patch
    white.patch
    latest_iwhite.patch
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