|
Last change
on this file was
6550,
checked in by westram, 16 years ago
|
- split AWTI into gui/nongui parts (only for export atm, non-gui import code may go to SL/SEQIO later)
|
|
File size:
1.3 KB
|
| Line | |
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| 1 | // ============================================================= // |
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| 2 | // // |
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| 3 | // File : seqio.hxx // |
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| 4 | // Purpose : // |
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| 5 | // // |
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| 6 | // Institute of Microbiology (Technical University Munich) // |
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| 7 | // http://www.arb-home.de/ // |
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| 8 | // // |
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| 9 | // ============================================================= // |
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| 10 | |
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| 11 | #ifndef SEQIO_HXX |
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| 12 | #define SEQIO_HXX |
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| 13 | |
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| 14 | #ifndef ARBDB_BASE_H |
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| 15 | #include <arbdb_base.h> |
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| 16 | #endif |
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| 17 | |
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| 18 | class AP_filter; |
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| 19 | |
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| 20 | bool SEQIO_read_string_pair(FILE *in, char *&s1, char *&s2, size_t& lineNr); |
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| 21 | char *SEQIO_fgets(char *s, int size, FILE *stream); |
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| 22 | |
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| 23 | GB_ERROR SEQIO_export_by_format(GBDATA *gb_main, int marked_only, AP_filter *filter, |
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| 24 | int cut_stop_codon, int compress, const char *dbname, |
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| 25 | const char *formname, const char *outname, int multiple, |
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| 26 | char **real_outname); |
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| 27 | |
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| 28 | char *SEQIO_exportFormat_get_outfile_default_suffix(const char *formname, GB_ERROR& error); |
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| 29 | |
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| 30 | #else |
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| 31 | #error seqio.hxx included twice |
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| 32 | #endif // SEQIO_HXX |
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