| 1 | #!/bin/bash |
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| 2 | # |
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| 3 | # How to use: |
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| 4 | # |
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| 5 | # A. SETUP |
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| 6 | # -------- |
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| 7 | # |
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| 8 | # 1. create a new directory, e.g. |
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| 9 | # mkdir my_arb_compile; cd my_arb_compile |
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| 10 | # |
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| 11 | # 2. checkout arb, e.g. (the last argument is the name of the target directory) |
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| 12 | # svn co svn+ssh://USERNAME@svn.arb-home.de/svn/ARB/trunk myARB |
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| 13 | # # or |
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| 14 | # svn co http://svn.mikro.biologie.tu-muenchen.de/readonly/trunk myARB |
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| 15 | # |
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| 16 | # 3. link the included compile script, e.g. |
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| 17 | # ln -s myARB/util/arb_compile.sh compile_myARB.sh |
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| 18 | # |
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| 19 | # 4. call the script |
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| 20 | # ./compile_myARB.sh |
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| 21 | # |
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| 22 | # 5. review the generated config |
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| 23 | # vi compile_myARB.config |
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| 24 | # |
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| 25 | # 6. call the script again (this will generate config.makefile and fail) |
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| 26 | # ./compile_myARB.sh |
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| 27 | # |
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| 28 | # 7. edit the generated config.makefile (default builds a openGL/64bit/linux-ARB) |
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| 29 | # vi myARB/config.makefile |
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| 30 | # |
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| 31 | # 8. call the script again (this shall succeed) |
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| 32 | # ./compile_myARB.sh |
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| 33 | # |
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| 34 | # |
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| 35 | # B. UPGRADE |
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| 36 | # ----------- |
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| 37 | # |
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| 38 | # 1. simply call the script to upgrade ARB to newest revision |
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| 39 | # ./compile_myARB.sh |
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| 40 | # |
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| 41 | # |
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| 42 | # C. Multiple versions (in one 'my_arb_compile' directory) |
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| 43 | # -------------------- |
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| 44 | # |
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| 45 | # When you use a different name for the link target in step A.3. it |
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| 46 | # is possible to work with multiple checkouts and multiple configs |
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| 47 | # inside the same 'my_arb_compile' directory. |
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| 48 | # The name used as checkout directory has to be changed for subsequent |
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| 49 | # versions. Change 'myARB' to a different name in steps A.2., A.3. and A.7 |
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| 50 | # |
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| 51 | |
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| 52 | |
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| 53 | default_config() { |
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| 54 | echo "# config to compile ARB via $BASENAME.sh" |
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| 55 | echo "" |
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| 56 | echo "# Subdirectory in which ARB is located:" |
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| 57 | echo "SUBDIR=myARB" |
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| 58 | echo "" |
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| 59 | echo "# Real CPU cores" |
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| 60 | echo "CORES=2" |
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| 61 | echo "" |
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| 62 | echo "# SVN revision to use (empty=newest)" |
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| 63 | echo "REVISION=" |
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| 64 | echo "" |
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| 65 | } |
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| 66 | |
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| 67 | update() { |
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| 68 | set -x |
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| 69 | make clean && \ |
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| 70 | svn revert -R . && \ |
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| 71 | svn up --force $UPDATE_ARGS |
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| 72 | } |
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| 73 | build() { |
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| 74 | make -j$CORES tarfile |
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| 75 | } |
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| 76 | |
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| 77 | upgrade() { |
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| 78 | echo "Upgrading ARB checkout in '$ARBHOME'" |
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| 79 | echo "" |
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| 80 | echo "Starting build process" |
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| 81 | echo "(you may watch the output using" |
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| 82 | echo " less +F $LOG" |
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| 83 | echo "in another terminal)" |
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| 84 | echo "" |
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| 85 | (update && build) >& $LOG |
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| 86 | } |
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| 87 | |
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| 88 | arbshell() { |
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| 89 | echo "ARBHOME now is '$ARBHOME'" |
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| 90 | $ARBHOME/bin/arb_ntree --help 2>&1 | grep version |
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| 91 | tcsh |
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| 92 | ARBHOME=$OLDARBHOME |
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| 93 | echo "ARBHOME now is again '$ARBHOME'" |
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| 94 | } |
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| 95 | |
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| 96 | # ---------------------------------------- |
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| 97 | |
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| 98 | if [ !$?ARBHOME ]; then |
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| 99 | ARBHOME='' |
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| 100 | fi |
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| 101 | OLDARBHOME=$ARBHOME |
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| 102 | |
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| 103 | BASEDIR=`pwd` |
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| 104 | BASENAME=`basename $0 | perl -pne 's/.sh//'` |
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| 105 | |
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| 106 | echo "BASENAME='$BASENAME'" |
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| 107 | |
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| 108 | CONFIG=$BASENAME.config |
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| 109 | LOG=$BASEDIR/$BASENAME.log |
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| 110 | |
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| 111 | if [ -f $CONFIG ]; then |
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| 112 | source $CONFIG |
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| 113 | else |
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| 114 | default_config > $CONFIG |
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| 115 | echo "$CONFIG has been generated" |
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| 116 | SUBDIR= |
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| 117 | fi |
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| 118 | |
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| 119 | if [ "$SUBDIR" = "" ]; then |
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| 120 | echo "Review config, then rerun this script" |
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| 121 | else |
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| 122 | ARBHOME=$BASEDIR/$SUBDIR |
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| 123 | |
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| 124 | if [ ! -d $ARBHOME ]; then |
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| 125 | echo "ARBHOME='$ARBHOME' (no such directory)" |
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| 126 | else |
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| 127 | PATH=$ARBHOME/bin:$PATH |
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| 128 | if [ !$?LD_LIBRARY_PATH ]; then |
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| 129 | LD_LIBRARY_PATH=$ARBHOME/lib |
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| 130 | fi |
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| 131 | LD_LIBRARY_PATH=$ARBHOME/lib:$LD_LIBRARY_PATH |
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| 132 | |
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| 133 | export ARBHOME PATH LD_LIBRARY_PATH |
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| 134 | |
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| 135 | cd $ARBHOME |
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| 136 | |
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| 137 | if [ "$REVISION" = "" ]; then |
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| 138 | UPDATE_ARGS= |
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| 139 | else |
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| 140 | UPDATE_ARGS="-r $REVISION" |
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| 141 | fi |
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| 142 | |
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| 143 | (upgrade && echo "ARB upgrade succeeded" && arbshell) || ( echo "Error: Something failed (see $LOG)" && false) |
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| 144 | fi |
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| 145 | fi |
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| 146 | |
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