|
Last change
on this file was
19446,
checked in by westram, 16 months ago
|
- introduce onlyC_flags
- flags used for C compilation only.
- similar to cxxflags (references added).
- pass down onlyC_flags into AxML, CLUSTAL, CLUSTALW, FASTDNAML, FASTTREE, GL, MrBAYES, PHYLIP, PHYML*, RAxML, SINA(unused), SOURCE_TOOLS, SUPPORT, TOOLS, TREEGEN + TREEPUZZLE.
- set flags to -Werror-implicit-function-declaration
- error is only effective in a small part of these modules.
- need to activate warnings → will activate the error as well.
|
-
Property svn:eol-style set to
native
-
Property svn:keywords set to
Author Date Id Revision
|
|
File size:
1.6 KB
|
| Line | |
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| 1 | .SUFFIXES: .o .c .depend |
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| 2 | |
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| 3 | SOURCE_FILES = $(wildcard *.c) |
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| 4 | |
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| 5 | OBJECTS = $(SOURCE_FILES:.c=.o) |
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| 6 | |
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| 7 | BINARY=$(ARBHOME)/bin/clustalw |
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| 8 | |
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| 9 | $(BINARY) : $(OBJECTS) |
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| 10 | $(A_CC) $(cflags) $(onlyC_flags) -o $@ $(OBJECTS) -lm |
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| 11 | |
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| 12 | .c.o: |
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| 13 | $(A_CC) $(cflags) $(onlyC_flags) -c -o $@ $< $(CC_INCLUDES) $(POST_COMPILE) $< |
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| 14 | |
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| 15 | clean: |
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| 16 | rm -f *.o $(BINARY) |
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| 17 | |
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| 18 | DEPENDS = $(OBJECTS:.o=.depend) |
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| 19 | depends: $(DEPENDS) |
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| 20 | @cat $(DEPENDS) | grep -v '^#' >>Makefile |
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| 21 | @rm $(DEPENDS) |
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| 22 | $(DEPENDS): depend.init |
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| 23 | depend.init: |
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| 24 | $(MAKEDEPEND) $(MAKEDEPENDFLAGS) 2>/dev/null # remove dependencies |
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| 25 | .c.depend: |
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| 26 | $(MAKEDEPEND) -f- $(MAKEDEPENDFLAGS) $< 2>/dev/null >$@ |
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| 27 | |
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| 28 | # DO NOT DELETE THIS LINE -- make depend depends on it. |
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| 29 | |
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| 30 | # Do not add dependencies manually - use 'make depend' in $ARBHOME |
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| 31 | # For formatting issues see SOURCE_TOOLS/fix_depends.pl (from GDE) |
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| 32 | |
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| 33 | alnscore.o: clustalw.h |
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| 34 | alnscore.o: general.h |
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| 35 | |
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| 36 | amenu.o: clustalw.h |
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| 37 | amenu.o: general.h |
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| 38 | |
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| 39 | calcgapcoeff.o: clustalw.h |
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| 40 | calcgapcoeff.o: general.h |
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| 41 | |
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| 42 | calcprf1.o: clustalw.h |
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| 43 | calcprf1.o: general.h |
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| 44 | |
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| 45 | calcprf2.o: clustalw.h |
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| 46 | calcprf2.o: general.h |
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| 47 | |
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| 48 | calctree.o: clustalw.h |
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| 49 | calctree.o: general.h |
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| 50 | |
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| 51 | clustalw.o: clustalw.h |
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| 52 | clustalw.o: general.h |
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| 53 | |
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| 54 | interface.o: clustalw.h |
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| 55 | interface.o: general.h |
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| 56 | interface.o: param.h |
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| 57 | interface.o: $(ARBHOME)/INCLUDE/gets_noOverflow.h |
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| 58 | |
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| 59 | malign.o: clustalw.h |
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| 60 | malign.o: general.h |
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| 61 | |
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| 62 | pairalign.o: clustalw.h |
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| 63 | pairalign.o: general.h |
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| 64 | |
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| 65 | prfalign.o: clustalw.h |
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| 66 | prfalign.o: general.h |
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| 67 | |
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| 68 | readmat.o: clustalw.h |
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| 69 | readmat.o: general.h |
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| 70 | readmat.o: matrices.h |
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| 71 | |
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| 72 | sequence.o: clustalw.h |
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| 73 | sequence.o: general.h |
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| 74 | |
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| 75 | showpair.o: clustalw.h |
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| 76 | showpair.o: general.h |
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| 77 | |
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| 78 | trees.o: clustalw.h |
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| 79 | trees.o: dayhoff.h |
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| 80 | trees.o: general.h |
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| 81 | |
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| 82 | util.o: clustalw.h |
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| 83 | util.o: general.h |
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| 84 | util.o: $(ARBHOME)/INCLUDE/gets_noOverflow.h |
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