| 1 | /* |
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| 2 | Copyright (c) 2006-2018 Elmar Pruesse <elmar.pruesse@ucdenver.edu> |
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| 3 | |
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| 4 | This file is part of SINA. |
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| 5 | SINA is free software: you can redistribute it and/or modify it under |
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| 6 | the terms of the GNU General Public License as published by the Free |
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| 7 | Software Foundation, either version 3 of the License, or (at your |
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| 8 | option) any later version. |
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| 9 | |
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| 10 | SINA is distributed in the hope that it will be useful, but WITHOUT ANY |
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| 11 | WARRANTY; without even the implied warranty of MERCHANTABILITY or |
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| 12 | FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License |
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| 13 | for more details. |
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| 14 | |
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| 15 | You should have received a copy of the GNU General Public License |
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| 16 | along with SINA. If not, see <http://www.gnu.org/licenses/>. |
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| 17 | |
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| 18 | Additional permission under GNU GPL version 3 section 7 |
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| 19 | |
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| 20 | If you modify SINA, or any covered work, by linking or combining it |
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| 21 | with components of ARB (or a modified version of that software), |
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| 22 | containing parts covered by the terms of the |
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| 23 | ARB-public-library-license, the licensors of SINA grant you additional |
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| 24 | permission to convey the resulting work. Corresponding Source for a |
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| 25 | non-source form of such a combination shall include the source code |
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| 26 | for the parts of ARB used as well as that of the covered work. |
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| 27 | */ |
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| 28 | |
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| 29 | #include "tray.h" |
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| 30 | #include <sstream> |
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| 31 | |
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| 32 | //#define DEBUG_TRAY |
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| 33 | #ifdef DEBUG_TRAY |
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| 34 | #define DBG(x) std::cerr << "TRAY (" << this << "): " << x << std::endl |
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| 35 | #else |
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| 36 | #define DBG(x) |
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| 37 | #endif |
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| 38 | |
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| 39 | |
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| 40 | namespace sina { |
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| 41 | |
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| 42 | tray::tray() { |
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| 43 | DBG("Construct"); |
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| 44 | } |
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| 45 | |
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| 46 | tray::tray(const tray& o) |
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| 47 | : seqno(o.seqno), |
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| 48 | input_sequence(o.input_sequence), |
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| 49 | aligned_sequence(o.aligned_sequence), |
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| 50 | alignment_reference(o.alignment_reference), |
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| 51 | search_result(o.search_result), |
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| 52 | astats(o.astats) |
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| 53 | { |
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| 54 | log.str(o.log.str()); |
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| 55 | DBG("Copy from " << &o); |
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| 56 | } |
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| 57 | |
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| 58 | tray& |
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| 59 | tray::operator=(const tray& o) { |
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| 60 | seqno=o.seqno; |
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| 61 | input_sequence=o.input_sequence; |
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| 62 | aligned_sequence=o.aligned_sequence; |
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| 63 | alignment_reference=o.alignment_reference; |
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| 64 | search_result=o.search_result; |
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| 65 | log.str(o.log.str()); |
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| 66 | astats=o.astats; |
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| 67 | |
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| 68 | DBG("Assign from " << &o); |
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| 69 | |
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| 70 | return *this; |
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| 71 | } |
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| 72 | |
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| 73 | tray::~tray() { |
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| 74 | DBG("Destruct"); |
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| 75 | } |
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| 76 | |
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| 77 | void |
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| 78 | tray::destroy() { |
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| 79 | delete input_sequence; |
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| 80 | delete aligned_sequence; |
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| 81 | delete alignment_reference; |
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| 82 | delete search_result; |
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| 83 | delete astats; |
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| 84 | |
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| 85 | DBG("Destroy"); |
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| 86 | } |
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| 87 | |
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| 88 | |
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| 89 | } // namespace sina; |
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| 90 | |
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| 91 | |
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| 92 | /* |
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| 93 | Local Variables: |
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| 94 | mode:c++ |
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| 95 | c-file-style:"stroustrup" |
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| 96 | c-file-offsets:((innamespace . 0)(inline-open . 0)(case-label . 0)) |
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| 97 | indent-tabs-mode:nil |
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| 98 | fill-column:99 |
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| 99 | End: |
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| 100 | */ |
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| 101 | // vim: filetype=cpp:expandtab:shiftwidth=4:tabstop=8:softtabstop=4:encoding=utf-8:textwidth=99 : |
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