source: trunk/SL/FAST_ALIGNER/Makefile @ 13443

Last change on this file since 13443 was 13443, checked in by westram, 11 years ago
File size: 4.9 KB
RevLine 
[10954]1# for variables passed from parent makefile see ../../SOURCE_TOOLS/parent_make.txt
[5885]2
3.SUFFIXES: .o .c .cxx .depend
4
5C_OBJECTS = 
6CPP_OBJECTS = $(subst .cxx,.o,$(wildcard *.cxx))
7OBJECTS=$(C_OBJECTS) $(CPP_OBJECTS)
8
9$(MAIN): $(OBJECTS)
10        $(LINK_STATIC_LIB) $(MAIN) $(OBJECTS)
11
12.cxx.o:
[13443]13        $(A_CXX) $(cflags) $(cxxflags) -c $< $(CXX_INCLUDES) $(POST_COMPILE) $<
[5885]14
15.c.o:
[13443]16        $(A_CC) $(cflags) -c $< $(CC_INCLUDES) $(POST_COMPILE) $<
[5885]17
18clean:
19        rm -f $(OBJECTS) *.a
20
21DEPENDS = $(OBJECTS:.o=.depend)
22depends: $(DEPENDS)
23        @cat $(DEPENDS) | grep -v '^#' >>Makefile
24        @rm $(DEPENDS)
25$(DEPENDS): depend.init
26depend.init:
27        $(MAKEDEPEND) $(MAKEDEPENDFLAGS) 2>/dev/null # remove dependencies
28.c.depend:
29        $(MAKEDEPEND) -f- $(MAKEDEPENDFLAGS) $< 2>/dev/null >$@
30.cxx.depend:
31        $(MAKEDEPEND) -f- $(MAKEDEPENDFLAGS) $< 2>/dev/null >$@
32
33# DO NOT DELETE
34
35# Do not add dependencies manually - use 'make depend' in $ARBHOME
[9575]36# For formatting issues see SOURCE_TOOLS/fix_depends.pl (from SL)
[5885]37
38ClustalV.o: ClustalV.hxx
[6426]39ClustalV.o: seq_search.hxx
[5885]40ClustalV.o: $(ARBHOME)/INCLUDE/arb_assert.h
[6814]41ClustalV.o: $(ARBHOME)/INCLUDE/arb_core.h
[6277]42ClustalV.o: $(ARBHOME)/INCLUDE/arb_error.h
[5885]43ClustalV.o: $(ARBHOME)/INCLUDE/arbdb_base.h
[7623]44ClustalV.o: $(ARBHOME)/INCLUDE/arbtools.h
[5885]45ClustalV.o: $(ARBHOME)/INCLUDE/attributes.h
[6868]46ClustalV.o: $(ARBHOME)/INCLUDE/aw_base.hxx
47ClustalV.o: $(ARBHOME)/INCLUDE/aw_msg.hxx
[7424]48ClustalV.o: $(ARBHOME)/INCLUDE/BI_basepos.hxx
[9521]49ClustalV.o: $(ARBHOME)/INCLUDE/cxxforward.h
[6331]50ClustalV.o: $(ARBHOME)/INCLUDE/dupstr.h
[9516]51ClustalV.o: $(ARBHOME)/INCLUDE/gccver.h
[6277]52ClustalV.o: $(ARBHOME)/INCLUDE/smartptr.h
[6817]53ClustalV.o: $(ARBHOME)/INCLUDE/test_global.h
[8919]54ClustalV.o: $(ARBHOME)/INCLUDE/test_unit.h
[5885]55
56fast_aligner.o: ClustalV.hxx
57fast_aligner.o: fast_aligner.hxx
[6426]58fast_aligner.o: seq_search.hxx
[11023]59fast_aligner.o: $(ARBHOME)/INCLUDE/ad_cb.h
60fast_aligner.o: $(ARBHOME)/INCLUDE/ad_cb_prot.h
[5885]61fast_aligner.o: $(ARBHOME)/INCLUDE/ad_prot.h
62fast_aligner.o: $(ARBHOME)/INCLUDE/ad_t_prot.h
63fast_aligner.o: $(ARBHOME)/INCLUDE/arb_assert.h
[6814]64fast_aligner.o: $(ARBHOME)/INCLUDE/arb_core.h
65fast_aligner.o: $(ARBHOME)/INCLUDE/arb_defs.h
[6277]66fast_aligner.o: $(ARBHOME)/INCLUDE/arb_error.h
[7183]67fast_aligner.o: $(ARBHOME)/INCLUDE/arb_msg.h
[7186]68fast_aligner.o: $(ARBHOME)/INCLUDE/arb_progress.h
[7183]69fast_aligner.o: $(ARBHOME)/INCLUDE/arb_string.h
[7182]70fast_aligner.o: $(ARBHOME)/INCLUDE/arb_unit_test.h
[5885]71fast_aligner.o: $(ARBHOME)/INCLUDE/arbdb.h
72fast_aligner.o: $(ARBHOME)/INCLUDE/arbdb_base.h
73fast_aligner.o: $(ARBHOME)/INCLUDE/arbdbt.h
[6209]74fast_aligner.o: $(ARBHOME)/INCLUDE/arbtools.h
[5885]75fast_aligner.o: $(ARBHOME)/INCLUDE/attributes.h
[6868]76fast_aligner.o: $(ARBHOME)/INCLUDE/aw_awar.hxx
[7916]77fast_aligner.o: $(ARBHOME)/INCLUDE/aw_awar_defs.hxx
[5885]78fast_aligner.o: $(ARBHOME)/INCLUDE/aw_awars.hxx
[6868]79fast_aligner.o: $(ARBHOME)/INCLUDE/aw_base.hxx
[5885]80fast_aligner.o: $(ARBHOME)/INCLUDE/aw_keysym.hxx
[6868]81fast_aligner.o: $(ARBHOME)/INCLUDE/aw_msg.hxx
[8355]82fast_aligner.o: $(ARBHOME)/INCLUDE/aw_question.hxx
[5885]83fast_aligner.o: $(ARBHOME)/INCLUDE/aw_root.hxx
84fast_aligner.o: $(ARBHOME)/INCLUDE/aw_window.hxx
85fast_aligner.o: $(ARBHOME)/INCLUDE/awt_sel_boxes.hxx
86fast_aligner.o: $(ARBHOME)/INCLUDE/awtc_next_neighbours.hxx
[7424]87fast_aligner.o: $(ARBHOME)/INCLUDE/BI_basepos.hxx
[6868]88fast_aligner.o: $(ARBHOME)/INCLUDE/cb.h
[11034]89fast_aligner.o: $(ARBHOME)/INCLUDE/cb_base.h
[10212]90fast_aligner.o: $(ARBHOME)/INCLUDE/cbtypes.h
[9521]91fast_aligner.o: $(ARBHOME)/INCLUDE/cxxforward.h
[10563]92fast_aligner.o: $(ARBHOME)/INCLUDE/downcast.h
[6331]93fast_aligner.o: $(ARBHOME)/INCLUDE/dupstr.h
[9516]94fast_aligner.o: $(ARBHOME)/INCLUDE/gccver.h
[5885]95fast_aligner.o: $(ARBHOME)/INCLUDE/island_hopping.h
[8614]96fast_aligner.o: $(ARBHOME)/INCLUDE/pos_range.h
[8531]97fast_aligner.o: $(ARBHOME)/INCLUDE/PT_global_defs.h
[8696]98fast_aligner.o: $(ARBHOME)/INCLUDE/RangeList.h
[6277]99fast_aligner.o: $(ARBHOME)/INCLUDE/smartptr.h
[10212]100fast_aligner.o: $(ARBHOME)/INCLUDE/static_assert.h
[6817]101fast_aligner.o: $(ARBHOME)/INCLUDE/test_global.h
[6691]102fast_aligner.o: $(ARBHOME)/INCLUDE/test_unit.h
[10212]103fast_aligner.o: $(ARBHOME)/INCLUDE/ttypes.h
[6426]104
105seq_search.o: seq_search.hxx
[7051]106seq_search.o: $(ARBHOME)/INCLUDE/ad_prot.h
107seq_search.o: $(ARBHOME)/INCLUDE/ad_t_prot.h
[6426]108seq_search.o: $(ARBHOME)/INCLUDE/arb_assert.h
[6814]109seq_search.o: $(ARBHOME)/INCLUDE/arb_core.h
[6426]110seq_search.o: $(ARBHOME)/INCLUDE/arb_error.h
[7183]111seq_search.o: $(ARBHOME)/INCLUDE/arb_msg.h
[7316]112seq_search.o: $(ARBHOME)/INCLUDE/arb_strbuf.h
[7183]113seq_search.o: $(ARBHOME)/INCLUDE/arb_string.h
[7051]114seq_search.o: $(ARBHOME)/INCLUDE/arbdb.h
[6426]115seq_search.o: $(ARBHOME)/INCLUDE/arbdb_base.h
[7051]116seq_search.o: $(ARBHOME)/INCLUDE/arbdbt.h
117seq_search.o: $(ARBHOME)/INCLUDE/arbtools.h
[6426]118seq_search.o: $(ARBHOME)/INCLUDE/attributes.h
[6868]119seq_search.o: $(ARBHOME)/INCLUDE/aw_base.hxx
120seq_search.o: $(ARBHOME)/INCLUDE/aw_msg.hxx
[7424]121seq_search.o: $(ARBHOME)/INCLUDE/BI_basepos.hxx
[9521]122seq_search.o: $(ARBHOME)/INCLUDE/cxxforward.h
[10563]123seq_search.o: $(ARBHOME)/INCLUDE/downcast.h
[6426]124seq_search.o: $(ARBHOME)/INCLUDE/dupstr.h
[9516]125seq_search.o: $(ARBHOME)/INCLUDE/gccver.h
[6426]126seq_search.o: $(ARBHOME)/INCLUDE/smartptr.h
[10563]127seq_search.o: $(ARBHOME)/INCLUDE/static_assert.h
[6817]128seq_search.o: $(ARBHOME)/INCLUDE/test_global.h
[7316]129seq_search.o: $(ARBHOME)/INCLUDE/test_helpers.h
130seq_search.o: $(ARBHOME)/INCLUDE/test_unit.h
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