source: trunk/UNIT_TESTER/run/impexp/conv.SWISSPROT_2_PHYLIP.expected

Last change on this file was 8607, checked in by westram, 14 years ago

merge from e4fix [8135] [8136] [8137] [8138] [8139] [8140] [8141] [8142] [8143] [8144] [8222]
(this revives the reverted patches [8129] [8130] [8131] [8132]; see [8133])

  • fixes
    • some free/delete mismatches
    • wrong definition of ORF objects (Level was no bit value)
    • amino consensus (failed for columns only containing 'C')
  • rename
    • AA_sequence_term → orf_term
    • ED4_sequence_terminal_basic → ED4_abstract_sequence_terminal
  • cleaned up hierarchy dumps
  • tweaked is_terminal()/to_terminal()
File size: 344 bytes
Line 
1       1      282
2MA32_HUMAN MLPLLRCVPR VLGSSVAGLR AAAPASPFRQ LLQPAPRLCT RPFGLLSVRA
3
4GSERRPGLLR PRGPCACGCG CGSLHTDGDK AFVDFLSDEI KEERKIQKHK TLPKMSGGWE
5
6LELNGTEAKL VRKVAGEKIT VTFNINNSIP PTFDGEEEPS QGQKVEEQEP ELTSTPNFVV
7
8EVIKNDDGKK ALVLDCHYPE DEVGQEDEAE SDIFSIREVS FQSTGESEWK DTNYTLNTDS
9
10LDWALYDHLM DFLADRGVDN TFADELVELS TALEHQEYIT FLEDLKSFVK SQ
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