source: trunk/UNIT_TESTER/run/impexp/genbank.input

Last change on this file was 7046, checked in by westram, 14 years ago
File size: 6.9 KB
Line 
1LOCUS       AF375552;     327 bp    RNA             RNA       31-MAY-2001
2DEFINITION  Lactococcus lactis subsp. lactis strain NCDO2118 tmRNA gene,
3            partial sequence.
4ACCESSION   AF375552;
5KEYWORDS    No information.
6SOURCE      Lactococcus lactis subsp. lactis
7  ORGANISM  Lactococcus lactis subsp. lactis
8REFERENCE   1  (bases 1 to 310)
9  AUTHORS   Schoenhuber,W., Le Bourhis,G., Tremblay,J., Amann,R. and
10            Kulakauskas,S.
11  TITLE     Utilization of tmRNA sequences for bacterial identification
12  JOURNAL   BMC Microbiol. 1(1), 20-20 (2001)
13  STANDARD  No information
14REFERENCE   2  (bases 1 to 310)
15  AUTHORS   Schoenhuber,W., Le Bourhis,G., Tremblay,J., Amann,R.I. and
16            Kulakauskas,S.
17  JOURNAL   Submitted (02-MAY-2001) to the EMBL/GenBank/DDBJ databases.
18            Microbiology, Institut National de la Recherche Agronomique,
19            Domaine de Vilvert, Jouy-en-Josas 78352, France
20  STANDARD  No information
21COMMENTS    Organism information
22              Culture collection: NCDO 2118 tmRNA gene
23            Sequence information (bases 1 to 310)
24              Corresponding GenBank entry: AF375552;
25            Please note: all these entries have been modified for test purposes.
26            *source: strain=NCDO2118 tmRNA gene, partial sequence;
27            *source: subspecies=lactis;
28BASE COUNT      91 a     59 c     74 g     86 t
29ORIGIN
30        1 cattgtcgcg catgaactgc aactgctgag ggatcaggat aatcatccgc agataaatat
31       61 aactgctaaa aataatacac aaacttacgc aatggcagcc taaacagcac catgcgtgcc
32      121 tgatttttgc tcactgatgg caatttgacg gcctaaactt ttagtcagat acgttgttgt
33      181 ggaggcttga cgcagcaaaa gagatttaaa gccccgcaaa atgtcgctgt ttgagactgg
34      241 ctttggcatt ttgttaaatt tgagaaagtc ctatggttgt agacgttgat gtagcaaggt
35      301 gtttggacag
36//
37LOCUS       HSFAU
38ACCESSION   X65923
39DEFINITION  H.sapiens fau mRNA
40BASE COUNT      125 a    139 c    148 g    106 t
41ORIGIN
42       1  ttcctctttc tcgactccat cttcgcggta gctgggaccg ccgttcagtc gccaatatgc
43      61  agctctttgt ccgcgcccag gagctacaca ccttcgaggt gaccggccag gaaacggtcg
44     121  cccagatcaa ggctcatgta gcctcactgg agggcattgc cccggaagat caagtcgtgc
45     181  tcctggcagg cgcgcccctg gaggatgagg ccactctggg ccagtgcggg gtggaggccc
46     241  tgactaccct ggaagtagca ggccgcatgc ttggaggtaa agttcatggt tccctggccc
47     301  gtgctggaaa agtgagaggt cagactccta aggtggccaa acaggagaag aagaagaaga
48     361  agacaggtcg ggctaagcgg cggatgcagt acaaccggcg ctttgtcaac gttgtgccca
49     421  cctttggcaa gaagaagggc cccaatgcca actcttaagt cttttgtaat tctggctttc
50     481  tctaataaaa aagccactta gttcagtcaa aaaaaaaa
51//
52LOCUS       HSFAU1
53ACCESSION   X65921
54DEFINITION  H.sapiens fau 1 gene
55            This is just a long text which overflows the maximum line size allowed for EMBL files
56            This_is_just_another_long_text_which_overflows_the_maximum_line_size_allowed_for_EMBL_files
57            ThisWordContainsExactlySixtyEightCharactersWhichIsTheLimitForconvert
58            ThisWordContainsExactlySixtyNineCharactersSoOneCharacterWillBeWrapped
59            ThisConverterLiesEverywhere!
60            ThisWordContainsExactlySeventyFourCharactersWhichIsRealTheLimitForEmblline
61COMMENTS    Organism information
62              Source of strain: This is the content of the special entry
63                    'Source of strain'
64              Former name: This is the content of the special entry 'Former
65                    name'
66              Alternate name: This is the content of the special entry
67                    'Alternate name'. It is quite long, since i need to test
68                    some special entry which occupies many lines and when i
69                    say many lines, i really mean at least five lines, so i
70                    could not stop writing before i came here.
71              Common name: This is the content of the special entry 'Common
72                    name'
73              Host organism: This is the content of the special entry 'Host
74                    organism'
75            Sequence information (bases 1 to 367)
76              RDP ID: This is the content of the special entry 'RDP ID'
77              Corresponding GenBank entry: X65921;
78              Sequencing methods: This is the content of the special entry
79                    'Sequencing methods'
80              5' end complete: Yes
81              3' end complete: No
82            Organism and Sequence information have only been added for
83            test purposes. They are complete nonsense!
84BASE COUNT      421 a    562 c    538 g    495 t
85ORIGIN
86       1  ctaccatttt ccctctcgat tctatatgta cactcgggac aagttctcct gatcgaaaac
87      61  ggcaaaacta aggccccaag taggaatgcc ttagttttcg gggttaacaa tgattaacac
88     121  tgagcctcac acccacgcga tgccctcagc tcctcgctca gcgctctcac caacagccgt
89     181  agcccgcagc cccgctggac accggttctc catccccgca gcgtagcccg gaacatggta
90     241  gctgccatct ttacctgcta cgccagcctt ctgtgcgcgc aactgtctgg tcccgccccg
91     301  tcctgcgcga gctgctgccc aggcaggttc gccggtgcga gcgtaaaggg gcggagctag
92     361  gactgccttg ggcggtacaa atagcaggga accgcgcggt cgctcagcag tgacgtgaca
93     421  cgcagcccac ggtctgtact gacgcgccct cgcttcttcc tctttctcga ctccatcttc
94     481  gcggtagctg ggaccgccgt tcaggtaaga atggggcctt ggctggatcc gaagggcttg
95     541  tagcaggttg gctgcggggt cagaaggcgc ggggggaacc gaagaacggg gcctgctccg
96     601  tggccctgct ccagtcccta tccgaactcc ttgggaggca ctggccttcc gcacgtgagc
97     661  cgccgcgacc accatcccgt cgcgatcgtt tctggaccgc tttccactcc caaatctcct
98     721  ttatcccaga gcatttcttg gcttctctta caagccgtct tttctttact cagtcgccaa
99     781  tatgcagctc tttgtccgcg cccaggagct acacaccttc gaggtgaccg gccaggaaac
100     841  ggtcgcccag atcaaggtaa ggctgcttgg tgcgccctgg gttccatttt cttgtgctct
101     901  tcactctcgc ggcccgaggg aacgcttacg agccttatct ttccctgtag gctcatgtag
102     961  cctcactgga gggcattgcc ccggaagatc aagtcgtgct cctggcaggc gcgcccctgg
103    1021  aggatgaggc cactctgggc cagtgcgggg tggaggccct gactaccctg gaagtagcag
104    1081  gccgcatgct tggaggtgag tgagagagga atgttctttg aagtaccggt aagcgtctag
105    1141  tgagtgtggg gtgcatagtc ctgacagctg agtgtcacac ctatggtaat agagtacttc
106    1201  tcactgtctt cagttcagag tgattcttcc tgtttacatc cctcatgttg aacacagacg
107    1261  tccatgggag actgagccag agtgtagttg tatttcagtc acatcacgag atcctagtct
108    1321  ggttatcagc ttccacacta aaaattaggt cagaccaggc cccaaagtgc tctataaatt
109    1381  agaagctgga agatcctgaa atgaaactta agatttcaag gtcaaatatc tgcaactttg
110    1441  ttctcattac ctattgggcg cagcttctct ttaaaggctt gaattgagaa aagaggggtt
111    1501  ctgctgggtg gcaccttctt gctcttacct gctggtgcct tcctttccca ctacaggtaa
112    1561  agtccatggt tccctggccc gtgctggaaa agtgagaggt cagactccta aggtgagtga
113    1621  gagtattagt ggtcatggtg ttaggacttt ttttcctttc acagctaaac caagtccctg
114    1681  ggctcttact cggtttgcct tctccctccc tggagatgag cctgagggaa gggatgctag
115    1741  gtgtggaaga caggaaccag ggcctgatta accttccctt ctccaggtgg ccaaacagga
116    1801  gaagaagaag aagaagacag gtcgggctaa gcggcggatg cagtacaacc ggcgctttgt
117    1861  caacgttgtg cccacctttg gcaagaagaa gggccccaat gccaactctt aagtcttttg
118    1921  taattctggc tttctctaat aaaaaagcca cttagttcag tcatcgcatt gtttcatctt
119    1981  tacttgcaag gcctcaggga gaggtgtgct tctcgg
120//
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