source: branches/stable/HELP_SOURCE/oldhelp/pa_locopti.hlp

Last change on this file was 13625, checked in by westram, 10 years ago
File size: 1.4 KB
Line 
1#Please insert up references in the next lines (line starts with keyword UP)
2UP      arb.hlp
3UP      glossary.hlp
4UP      pa_optimizer.hlp
5
6#Please insert subtopic references  (line starts with keyword SUB)
7SUB     pa_globopti.hlp
8
9# Hypertext links in helptext can be added like this: LINK{ref.hlp|http://add|bla@domain}
10
11#************* Title of helpfile !! and start of real helpfile ********
12TITLE           Local optimization
13
14OCCURRENCE      ARB_PARSIMONY/Tree/Tree Optimization/Recursive NNI
15                ARB_PARSIMONY/<NNI-mode-button>
16
17DESCRIPTION     Locally optimizes (parts of) the current tree.
18
19                When called from the 'Tree optimization' window, the optimization is always
20                applied to the whole tree. When called via LINK{mode_nni.hlp}, it depends on
21                where you click to.
22                The settings from LINK{pa_optimizer.hlp} are used to select
23                the branches to optimize (e.g. marked and/or visible only).
24
25                At each such branch, this optimization attempts one NNI (see LINK{nni.hlp}).
26                If the tree topology improves by that modification, it will be kept.
27                Otherwise it will be undone.
28
29                If a better topology has been found, the recursion starts again (and again...)
30                until no NNI further improved the tree (see LINK{mode_nni.hlp} for exceptions).
31
32NOTES           None
33
34EXAMPLES        None
35
36WARNINGS        None
37
38BUGS            No bugs known
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