source: tags/ms_r17q1

Name Size Rev Age Author Last Change
../
AISC ​ 15529   8 years westram * reintegrates 'warnings' into 'trunk' - use gnu++14-standard for …
AISC_COM ​ 15094   8 years westram * reintegrates 'fix' into 'trunk' * adds: …
AISC_MKPTPS ​ 15274   8 years westram * fix promotion of comments - interpreted text already is …
ARB_GDE ​ 15398   8 years westram * partial merge from 'mladd' into 'trunk' - GDE fixes * adds: …
ARBDB ​ 15966   8 years westram * reintegrates 'group' into 'trunk' - implements #652 (group …
AWT ​ 15966   8 years westram * reintegrates 'group' into 'trunk' - implements #652 (group …
AWTC ​ 15176   8 years westram * reintegrates 'fixres' into 'trunk' - fixes #715 * adds: …
AWTI ​ 15176   8 years westram * reintegrates 'fixres' into 'trunk' - fixes #715 * adds: …
bin ​ 15425   8 years westram * reintegrates 'mladd' into 'trunk' - improves raxml8 interface …
BINDEP ​ 10577   11 years westram - added a bunch of small arb tools into dependency decls
BINDINGS ​ 10998   11 years westram * cflags were completely unused (untested)
BUGEX ​ 7044   14 years westram * fixed include wrappers (merges [7006] [7007]) - use gcc-style …
CONSENSUS_TREE ​ 15529   8 years westram * reintegrates 'warnings' into 'trunk' - use gnu++14-standard for …
CONVERTALN ​ 15529   8 years westram * reintegrates 'warnings' into 'trunk' - use gnu++14-standard for …
CORE ​ 15824   8 years westram * remove a dubious sync from GB_rename_file - responsible …
DBSERVER ​ 15587   8 years westram * reintegrates 'fix' into 'trunk' - fix OSX unittest for jenkins …
DIST ​ 15513   8 years westram * reintegrates 'warnings' into 'trunk' - activate additional …
doc ​ 6141   15 years westram * spellchecked all (phew)
EDIT4 ​ 15738   8 years westram * rename only
EISPACK ​ 13443   10 years westram * reintegrates 'vectorize' into 'trunk' - adds vectorization check …
etc ​ 6141   15 years westram * spellchecked all (phew)
GDE ​ 15656   8 years epruesse Allow skipping individual tool builds Tools built and distributed …
GDEHELP ​ 15425   8 years westram * reintegrates 'mladd' into 'trunk' - improves raxml8 interface …
GENOM ​ 15966   8 years westram * reintegrates 'group' into 'trunk' - implements #652 (group …
GENOM_IMPORT ​ 15587   8 years westram * reintegrates 'fix' into 'trunk' - fix OSX unittest for jenkins …
GFX ​ 12766   10 years epruesse attempt at building an icon for ARB databases
GL ​ 15254   8 years westram * depends for [15253]
HEADERLIBS ​ 14807   9 years westram * fix compilation with gcc 6.1.0 - fix shift-overflow in mafft …
HELP_SOURCE ​ 15966   8 years westram * reintegrates 'group' into 'trunk' - implements #652 (group …
ISLAND_HOPPING ​ 15529   8 years westram * reintegrates 'warnings' into 'trunk' - use gnu++14-standard for …
lib ​ 15966   8 years westram * reintegrates 'group' into 'trunk' - implements #652 (group …
MERGE ​ 15176   8 years westram * reintegrates 'fixres' into 'trunk' - fixes #715 * adds: …
MULTI_PROBE ​ 15781   8 years westram * partial merge from 'group' into 'trunk' - improve …
NALIGNER ​ 15176   8 years westram * reintegrates 'fixres' into 'trunk' - fixes #715 * adds: …
NAMES ​ 15176   8 years westram * reintegrates 'fixres' into 'trunk' - fixes #715 * adds: …
NAMES_COM ​ 15094   8 years westram * reintegrates 'fix' into 'trunk' * adds: …
NTREE ​ 15966   8 years westram * reintegrates 'group' into 'trunk' - implements #652 (group …
PARSIMONY ​ 15703   8 years westram * reintegrates 'group' into 'trunk' - implements #709 * adds: …
PERL2ARB ​ 15579   8 years westram * reintegrates 'unittest' into 'trunk' - activates unittests under …
PERL_SCRIPTS ​ 14674   9 years westram * rename GB_write_as_string → GB_write_autoconv_string
PERLTOOLS ​ 15198   8 years westram * remove virtual if OVERRIDE is present - OVERRIDE …
PHYLO ​ 15256   8 years westram * replace redundant data AW_font_limits::height with …
PRIMER_DESIGN ​ 15176   8 years westram * reintegrates 'fixres' into 'trunk' - fixes #715 * adds: …
PROBE ​ 15529   8 years westram * reintegrates 'warnings' into 'trunk' - use gnu++14-standard for …
PROBE_COM ​ 15176   8 years westram * reintegrates 'fixres' into 'trunk' - fixes #715 * adds: …
PROBE_DESIGN ​ 15781   8 years westram * partial merge from 'group' into 'trunk' - improve …
PROBE_SET ​ 15738   8 years westram * rename only
ptpan ​ 13443   10 years westram * reintegrates 'vectorize' into 'trunk' - adds vectorization check …
READSEQ ​ 15411   8 years westram * fix warnings caused by converted documentation - conversion of …
RNA3D ​ 15665   8 years westram * reintegrates 'refactor' into 'trunk' - refactored AWT_graphic …
RNACMA ​ 15579   8 years westram * reintegrates 'unittest' into 'trunk' - activates unittests under …
SECEDIT ​ 15673   8 years westram * reintegrates 'fix' into 'trunk' - fixes "jump to species" broken …
SEQ_QUALITY ​ 15513   8 years westram * reintegrates 'warnings' into 'trunk' - activate additional …
SERVERCNTRL ​ 15176   8 years westram * reintegrates 'fixres' into 'trunk' - fixes #715 * adds: …
SH ​ 14798   9 years westram * fix Ubuntu 16.04 build - add gcc 5.3.1 * fix isnan/isinf …
SL ​ 15966   8 years westram * reintegrates 'group' into 'trunk' - implements #652 (group …
SOURCE_TOOLS ​ 15966   8 years westram * reintegrates 'group' into 'trunk' - implements #652 (group …
STAT ​ 15176   8 years westram * reintegrates 'fixres' into 'trunk' - fixes #715 * adds: …
TEMPLATES ​ 15966   8 years westram * reintegrates 'group' into 'trunk' - implements #652 (group …
TOOLS ​ 15876   8 years westram * reintegrates 'fix' into 'trunk' - automatically deletes field …
TREEGEN ​ 15484   8 years westram * reintegrates 'warnings' into 'trunk' - fixes compiler warnings …
UNIT_TESTER ​ 15966   8 years westram * reintegrates 'group' into 'trunk' - implements #652 (group …
util ​ 15822   8 years westram * partial merge from 'group' into 'trunk' (minor changes) * adds: …
WETC ​ 15176   8 years westram * reintegrates 'fixres' into 'trunk' - fixes #715 * adds: …
WINDOW ​ 15966   8 years westram * reintegrates 'group' into 'trunk' - implements #652 (group …
XML ​ 15513   8 years westram * reintegrates 'warnings' into 'trunk' - activate additional …
XML_IMPORT ​ 14038   9 years westram * fix #618 (use ar for linking) - library order does matter now …
arb_CHANGES.txt 22.7 KB ​ 15966   8 years westram * reintegrates 'group' into 'trunk' - implements #652 (group …
arb_install.sh 14.2 KB ​ 11718   11 years westram * reverts [11717] * merge [11714] into trunk (accidentally went into …
arb_INSTALL.txt 4.6 KB ​ 14798   9 years westram * fix Ubuntu 16.04 build - add gcc 5.3.1 * fix isnan/isinf …
arb_LICENSE.txt 11.1 KB ​ 15365   8 years westram * allow use of selected parts of arb source in GPL licensed projects
arb_OS_X.txt 5.4 KB ​ 14411   9 years westram * fix svn-access URLs [Note: test-commit to new server from svn+ssh WC]
arb_OS_X_MacPorts.txt 370 bytes ​ 6288   15 years westram * include ALL arb_*.txt into release tarball * renamed …
arb_PUBLIB_LICENSE.txt 2.2 KB ​ 15367   8 years epruesse revert … misunderstood the meaning of the file name …
arb_README.txt 7.4 KB ​ 14141   9 years westram * "ressource" → "resource"
arb_UBUNTU.txt 1.3 KB ​ 14798   9 years westram * fix Ubuntu 16.04 build - add gcc 5.3.1 * fix isnan/isinf …
arbsrc_README.txt 210 bytes ​ 6288   15 years westram * include ALL arb_*.txt into release tarball * renamed …
arbsrc_README_gcc.txt 2.1 KB ​ 7331   14 years westram - tested and added gcc 4.5.2
config.makefile.template 1.8 KB ​ 13077   10 years westram * reintegrates 'sanitize' into 'trunk' * adds: - …
demo.arb 102.1 KB ​ 15966   8 years westram * reintegrates 'group' into 'trunk' - implements #652 (group …
Doxyfile 62.3 KB ​ 11492   11 years westram * fix several doxygen issues (doxygen 1.6.3) - force macro …
Makefile 76.6 KB ​ 15966   8 years westram * reintegrates 'group' into 'trunk' - implements #652 (group …
README 717 bytes ​ 5390   16 years westram - TAB-Ex
  • Property svn:ignore set to
    *.last_gcc
    ARB_SOURCE_DOC
    ChangeLog
    INCLUDE
    PERL5
    arb.tgz
    arbsrc.lst
    arbsrc_*.tgz
    compile.log
    config.makefile
    do_core
    TAGS
    .cdtproject
    .project
    .settings
    arbsrc.tgz
    *.bak
    arb_time.log
    latest.patch
    patches.arb
    makeloc.here
    interdiff.patch
    white.patch
    latest_iwhite.patch
    nbproject
    fulldiff.patch
    untested.patch
    *.last_compiler
    arb-dev.tgz
  • Property svn:mergeinfo set to (toggle deleted branches)
    /branches/alilink11490-11577,​12419-12666,​12669-12705,​12708-12753,​12801-12802,​12854,​12856-12865,​12867,​14000
    /branches/help10647-10841
    /branches/stable12378-12722
    /branches/tree10290-10481,​10500-11400,​11403-11422,​11425-11487,​11556-11559,​12004-12019,​12116-12120,​15347-15373
    /branches/ProbeMatchCollection13801-13922
    /branches/aci10844-11080
    /branches/addtest12468-12472,​13123-13260,​13523-13551,​13570,​13650-13653,​14319-14326
    /branches/bpcb10161-10208
    /branches/bpcbold10163-10164,​10180,​10182-10185,​10191-10192
    /branches/bugrep11744-11753
    /branches/check13365-13375,​13450-13457
    /branches/check213458-13465
    /branches/cleanup11876-11885,​14598-14603
    /branches/cluster12869-12876
    /branches/color14896-14915,​14920-15053
    /branches/config14199-14255
    /branches/consensus14276-14424
    /branches/customize11828-11873,​11913-11947,​11950-11967
    /branches/cxx119320-9515
    /branches/db9626-9836,​15618-15623,​15628-15639
    /branches/dbcb9731-9739
    /branches/dbsave14521-14555,​14558-14576
    /branches/dbui10305-10348
    /branches/deb11801-11814
    /branches/dev7288-7291,​7294-7296,​7824-7828,​7830,​7833-7834,​7837-7838,​7841-7843,​7845-7848,​7876-7877,​7912,​7914,​7938-7939,​7942-7943,​7967,​7969-7970,​7972-7974,​7976-7977,​9506-9507
    /branches/dev_elmar7699-8224
    /branches/dist11501-11512
    /branches/e4fix8134-8632
    /branches/errhandle15275-15278
    /branches/fix11579-11625,​11890-11901,​11904-11910,​11985-11997,​12008-12013,​12023-12042,​12049-12053,​12058-12137,​12147-12156,​12445-12456,​12806-12833,​12839-12847,​13522-13588,​14645-14667,​14810-14812,​15066-15093,​15582-15586,​15668-15672,​15870-15875
    /branches/fixMergeinfo9177-9181
    /branches/fixres13270-13326,​15127-15175
    /branches/fixwarn14815-14832
    /branches/flags15098-15222,​15225-15287
    /branches/gcc12076-12079,​12995-13018
    /branches/gde14670-14785
    /branches/group15693-15702,​15733-15965
    /branches/gtk9379,​9432
    /branches/gtk_only9554,​9698,​9745,​9749,​10108,​12404,​12406,​12408,​12763
    /branches/helptest10585-10720
    /branches/homebrew14911-14933
    /branches/keys15591-15690,​15706-15730
    /branches/macros9677-9841,​11761-11777,​11780-11797
    /branches/macros29840-10082
    /branches/markers13954-14024,​14027-14196
    /branches/merge9691-9796
    /branches/mladd15377-15391,​15394-15424
    /branches/nds10485-10493
    /branches/oldrealign12499,​12501,​12537,​12541,​12548,​12595,​12607,​12612,​12616,​12620,​12625,​12628,​12634,​12641
    /branches/pars12894-12900,​12938-13624,​13627-13754,​13811-13815,​15428-15458
    /branches/ptsdump8966-9000
    /branches/ptsfix8965-11059,​13960-13969
    /branches/ptsstartup9160-9446
    /branches/ptsundef9061-9358
    /branches/random15551-15558
    /branches/rc11679-11696,​11714
    /branches/redev11088-11125
    /branches/refactor15613-15664,​15820-15851
    /branches/remote14624-14640
    /branches/sai9504-9632,​9639-11520
    /branches/saiali8634-9188
    /branches/sanitize13023-13076,​15434-15446
    /branches/sativa12886-13068,​13202,​13241,​13263,​13274,​13304,​13345,​14543,​14563,​14659,​14662
    /branches/slv13152-13190
    /branches/stable_5.08635,​8655,​9163-9164,​9166,​9171
    /branches/sync15291-15339
    /branches/treeTests11198-11335
    /branches/ui14588-14621
    /branches/unittest15534-15578
    /branches/vectorize13428-13442
    /branches/warnings15468-15483,​15486-15512,​15515-15519,​15521-15528
    /branches/xpmfix9770-9776
Note: See TracBrowser for help on using the repository browser.