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../
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ad_cb.cxx
|
64.8 KB
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15759
|
8 years
|
westram |
* partial merge from 'group' into 'trunk'
- adds support for …
|
|
ad_cb.h
|
887 bytes
|
11023
|
11 years
|
westram |
* publish  callback interface separately from rest of interface
|
|
ad_cb_prot.h
|
1.2 KB
|
14006
|
9 years
|
westram |
* partial merge from 'alilink' into 'trunk'
- adds …
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ad_colorset.cxx
|
4.4 KB
|
14102
|
9 years
|
westram |
* delete existing 'ARB_color' entries when color is set to 0
|
|
ad_colorset.h
|
1.4 KB
|
14098
|
9 years
|
westram |
* refactored colorset handling
- moved basics to ARBDB
- …
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|
ad_config.cxx
|
10.8 KB
|
15176
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8 years
|
westram |
* reintegrates 'fixres' into 'trunk'
- fixes #715
* adds: …
|
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ad_config.h
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3.8 KB
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14256
|
9 years
|
westram |
* reintegrates 'config' into 'trunk' (implements #607)
* adds: …
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ad_core.cxx
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29.6 KB
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15759
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8 years
|
westram |
* partial merge from 'group' into 'trunk'
- adds support for …
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ad_hcb.h
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3.8 KB
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15759
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8 years
|
westram |
* partial merge from 'group' into 'trunk'
- adds support for …
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ad_io_inline.h
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3.1 KB
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15529
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8 years
|
westram |
* reintegrates 'warnings' into 'trunk'
- use gnu++14-standard for …
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ad_load.cxx
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56.1 KB
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16119
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7 years
|
westram |
* reintegrates 'saiexport' into 'trunk'
- implements #743
* …
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ad_p_prot.h
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999 bytes
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12888
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10 years
|
westram |
* fix #603
- abort all TAs and close all DBs
* in arb-perl …
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ad_prot.h
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19.9 KB
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15640
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8 years
|
westram |
* reintegrates 'db' into 'trunk'
- drops support for database type …
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ad_remote.h
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4.1 KB
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15176
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8 years
|
westram |
* reintegrates 'fixres' into 'trunk'
- fixes #715
* adds: …
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ad_save_load.cxx
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71.1 KB
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16077
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7 years
|
westram |
* reintegrates 'fix' into 'trunk'
- adds markerline to …
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ad_t_prot.h
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11.0 KB
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15627
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8 years
|
westram |
* partial merge from 'refactor' into 'trunk'
- remove  code …
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adali.cxx
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34.5 KB
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15176
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8 years
|
westram |
* reintegrates 'fixres' into 'trunk'
- fixes #715
* adds: …
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adcache.cxx
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9.4 KB
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15176
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8 years
|
westram |
* reintegrates 'fixres' into 'trunk'
- fixes #715
* adds: …
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adChangeKey.cxx
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10.2 KB
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15640
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8 years
|
westram |
* reintegrates 'db' into 'trunk'
- drops support for database type …
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adcomm.cxx
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64.0 KB
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15176
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8 years
|
westram |
* reintegrates 'fixres' into 'trunk'
- fixes #715
* adds: …
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adcompr.cxx
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32.4 KB
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15176
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8 years
|
westram |
* reintegrates 'fixres' into 'trunk'
- fixes #715
* adds: …
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adExperiment.cxx
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1.8 KB
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8607
|
13 years
|
westram |
merge from e4fix [8135] [8136] [8137] [8138] [8139] [8140] [8141] …
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adfile.cxx
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13.5 KB
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15176
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8 years
|
westram |
* reintegrates 'fixres' into 'trunk'
- fixes #715
* adds: …
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adGene.cxx
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34.6 KB
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15176
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8 years
|
westram |
* reintegrates 'fixres' into 'trunk'
- fixes #715
* adds: …
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adGene.h
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2.2 KB
|
7814
|
13 years
|
westram |
merge from dev [7760] [7761] [7763] [7764] [7765]
* Gene location …
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adhash.cxx
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41.6 KB
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15176
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8 years
|
westram |
* reintegrates 'fixres' into 'trunk'
- fixes #715
* adds: …
|
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adhashtools.cxx
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2.0 KB
|
8607
|
13 years
|
westram |
merge from e4fix [8135] [8136] [8137] [8138] [8139] [8140] [8141] …
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adindex.cxx
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35.8 KB
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15176
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8 years
|
westram |
* reintegrates 'fixres' into 'trunk'
- fixes #715
* adds: …
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aditem.cxx
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16.3 KB
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15176
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8 years
|
westram |
* reintegrates 'fixres' into 'trunk'
- fixes #715
* adds: …
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adlang1.cxx
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90.6 KB
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15176
|
8 years
|
westram |
* reintegrates 'fixres' into 'trunk'
- fixes #715
* adds: …
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admalloc.cxx
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19.6 KB
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15176
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8 years
|
westram |
* reintegrates 'fixres' into 'trunk'
- fixes #715
* adds: …
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admap.cxx
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22.1 KB
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15176
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8 years
|
westram |
* reintegrates 'fixres' into 'trunk'
- fixes #715
* adds: …
|
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admatch.cxx
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22.2 KB
|
16119
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7 years
|
westram |
* reintegrates 'saiexport' into 'trunk'
- implements #743
* …
|
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admath.cxx
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4.2 KB
|
15587
|
8 years
|
westram |
* reintegrates 'fix' into 'trunk'
- fix OSX unittest for jenkins …
|
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adname.cxx
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15.8 KB
|
15176
|
8 years
|
westram |
* reintegrates 'fixres' into 'trunk'
- fixes #715
* adds: …
|
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adoptimize.cxx
|
94.4 KB
|
15640
|
8 years
|
westram |
* reintegrates 'db' into 'trunk'
- drops support for database type …
|
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adperl.cxx
|
8.0 KB
|
15176
|
8 years
|
westram |
* reintegrates 'fixres' into 'trunk'
- fixes #715
* adds: …
|
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adperl.h
|
938 bytes
|
7624
|
13 years
|
westram |
* merge from dev [7473] [7474] [7475] [7476] [7477] [7478] [7479]
…
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adquery.cxx
|
75.1 KB
|
15876
|
8 years
|
westram |
* reintegrates 'fix' into 'trunk'
- automatically deletes field …
|
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adRevCompl.cxx
|
3.4 KB
|
15176
|
8 years
|
westram |
* reintegrates 'fixres' into 'trunk'
- fixes #715
* adds: …
|
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adseqcompr.cxx
|
40.4 KB
|
15513
|
8 years
|
westram |
* reintegrates 'warnings' into 'trunk'
- activate additional …
|
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adsocket.cxx
|
49.6 KB
|
15579
|
8 years
|
westram |
* reintegrates 'unittest' into 'trunk'
- activates unittests under …
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adstring.cxx
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43.2 KB
|
15425
|
8 years
|
westram |
* reintegrates 'mladd' into 'trunk'
- improves raxml8 interface
…
|
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adsystem.cxx
|
10.2 KB
|
15176
|
8 years
|
westram |
* reintegrates 'fixres' into 'trunk'
- fixes #715
* adds: …
|
|
adtcp.cxx
|
17.4 KB
|
15176
|
8 years
|
westram |
* reintegrates 'fixres' into 'trunk'
- fixes #715
* adds: …
|
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adTest.cxx
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9.7 KB
|
15640
|
8 years
|
westram |
* reintegrates 'db' into 'trunk'
- drops support for database type …
|
|
adtools.cxx
|
44.0 KB
|
16077
|
7 years
|
westram |
* reintegrates 'fix' into 'trunk'
- adds markerline to …
|
|
adtree.cxx
|
64.0 KB
|
15966
|
8 years
|
westram |
* reintegrates 'group' into 'trunk'
- implements #652 (group …
|
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adtune.cxx
|
2.1 KB
|
9838
|
12 years
|
westram |
* reintegrated branch 'db'
- GBDATA now is a base class of GBENTRY …
|
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arbdb.cxx
|
86.2 KB
|
16077
|
7 years
|
westram |
* reintegrates 'fix' into 'trunk'
- adds markerline to …
|
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arbdb.h
|
7.0 KB
|
15640
|
8 years
|
westram |
* reintegrates 'db' into 'trunk'
- drops support for database type …
|
|
arbdb_base.h
|
2.6 KB
|
13625
|
10 years
|
westram |
* reintegrates 'pars' into 'trunk'
- fixes #528, #609, #620, #631, …
|
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arbdbpp.cxx
|
1.8 KB
|
11578
|
11 years
|
westram |
* reintegrates 'alilink' into 'trunk'
- implements #420
* adds:
…
|
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arbdbt.h
|
2.7 KB
|
15529
|
8 years
|
westram |
* reintegrates 'warnings' into 'trunk'
- use gnu++14-standard for …
|
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dbitem_set.h
|
969 bytes
|
7636
|
13 years
|
westram |
* added basic reference entries handler
- goal: perform action on …
|
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gb_aci.h
|
2.7 KB
|
11080
|
11 years
|
westram |
* merge (10844 10845) from 'aci' into 'trunk':
* adds:
- …
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gb_cb.h
|
6.1 KB
|
14006
|
9 years
|
westram |
* partial merge from 'alilink' into 'trunk'
- adds …
|
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gb_comm.h
|
971 bytes
|
6656
|
15 years
|
westram |
- removed unneeded 'struct' keyword
- renamed several structs …
|
|
gb_compress.h
|
1.4 KB
|
9838
|
12 years
|
westram |
* reintegrated branch 'db'
- GBDATA now is a base class of GBENTRY …
|
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gb_data.h
|
11.2 KB
|
15640
|
8 years
|
westram |
* reintegrates 'db' into 'trunk'
- drops support for database type …
|
|
gb_dict.h
|
966 bytes
|
6325
|
15 years
|
westram |
* ARBDB
- hide internal structures (GBDATA etc.) inside ARBDB. …
|
|
gb_hashindex.h
|
3.8 KB
|
11598
|
11 years
|
epruesse |
add DJB2 as hash function for GB_hash (needs #define change to …
|
|
gb_header.h
|
2.3 KB
|
9838
|
12 years
|
westram |
* reintegrated branch 'db'
- GBDATA now is a base class of GBENTRY …
|
|
gb_index.h
|
3.2 KB
|
6656
|
15 years
|
westram |
- removed unneeded 'struct' keyword
- renamed several structs …
|
|
gb_key.h
|
2.1 KB
|
14006
|
9 years
|
westram |
* partial merge from 'alilink' into 'trunk'
- adds …
|
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gb_load.h
|
1.1 KB
|
6366
|
15 years
|
westram |
* fixed whitespace (scripted)
|
|
gb_local.h
|
2.6 KB
|
11578
|
11 years
|
westram |
* reintegrates 'alilink' into 'trunk'
- implements #420
* adds:
…
|
|
gb_localdata.h
|
2.2 KB
|
11888
|
11 years
|
westram |
- highlight differences in production code triggered by build-flag …
|
|
gb_main.h
|
7.0 KB
|
15640
|
8 years
|
westram |
* reintegrates 'db' into 'trunk'
- drops support for database type …
|
|
gb_map.h
|
1.1 KB
|
8607
|
13 years
|
westram |
merge from e4fix [8135] [8136] [8137] [8138] [8139] [8140] [8141] …
|
|
gb_memory.h
|
4.7 KB
|
15176
|
8 years
|
westram |
* reintegrates 'fixres' into 'trunk'
- fixes #715
* adds: …
|
|
gb_prot.h
|
8.2 KB
|
14054
|
9 years
|
westram |
* improve error handling in adcomm.cxx
- dont export errors …
|
|
gb_storage.h
|
2.0 KB
|
15529
|
8 years
|
westram |
* reintegrates 'warnings' into 'trunk'
- use gnu++14-standard for …
|
|
gb_t_prot.h
|
447 bytes
|
9838
|
12 years
|
westram |
* reintegrated branch 'db'
- GBDATA now is a base class of GBENTRY …
|
|
gb_ta.h
|
1.1 KB
|
9838
|
12 years
|
westram |
* reintegrated branch 'db'
- GBDATA now is a base class of GBENTRY …
|
|
gb_ts.h
|
2.1 KB
|
9838
|
12 years
|
westram |
* reintegrated branch 'db'
- GBDATA now is a base class of GBENTRY …
|
|
gb_tune.h
|
2.1 KB
|
9838
|
12 years
|
westram |
* reintegrated branch 'db'
- GBDATA now is a base class of GBENTRY …
|
|
gb_undo.h
|
2.1 KB
|
8607
|
13 years
|
westram |
merge from e4fix [8135] [8136] [8137] [8138] [8139] [8140] [8141] …
|
|
Makefile
|
43.8 KB
|
15691
|
8 years
|
westram |
* reintegrates 'keys' into 'trunk'
- implements part of #687 …
|
|
needs_libs.libARBDB_so
|
67 bytes
|
8574
|
13 years
|
westram |
* [8567] failed on WCs where shared libs were up-to-date, but not yet …
|
|
Synchronized_Alignments.txt
|
2.2 KB
|
6141
|
15 years
|
westram |
* spellchecked all (phew)
|
|
TreeNode.cxx
|
27.3 KB
|
15823
|
8 years
|
westram |
* partial merge of [15807] from 'group' into 'trunk'
|
|
TreeNode.h
|
25.3 KB
|
15876
|
8 years
|
westram |
* reintegrates 'fix' into 'trunk'
- automatically deletes field …
|
