Opened 15 years ago

Last modified 11 years ago

#207 new enhancement

bootstrap transfer

Reported by: westram Owned by: devel
Priority: normal Milestone:
Component: ARB_NTREE Version: SVN
Keywords: Cc:

Description (last modified by westram)

Function to transfer bootstrap values from tree A to tree B

Precondition:

  • Tree B has to contain all species contained in tree A
  • Tree B does not contain bootstraps (or overwrite option is active)

Algorithm:

  • For all subtrees of tree B existing in tree A copy bootstrap value
  • For all subtrees of tree B NOT existing in tree A set bootstrap value to zero
  • use consense tree library

Add related functions:

  • set bootstrap values of all branches w/o bootstrap to specific value (nonsense)
  • set all branches of groups with only bootstrap values smaller than a user-specified value to the same level (see #417)

Need implementation of

Change History (1)

comment:1 Changed 11 years ago by westram

  • Description modified (diff)
  • Priority changed from major to normal

When building consensus trees, it would be easily possible to preserve and merge existing bootstrap values into destination tree (by inserting bootstrap * weight instead of only weight).

Note: See TracTickets for help on using tickets.