Opened 10 years ago

Closed 10 years ago

#351 closed defect (fixed)

Editor crash with demo.arb and ali_16S selected

Reported by: epruesse Owned by: westram
Priority: normal Milestone:
Component: ARB_EDIT4 Version: SVN
Keywords: Cc:

Description

EDIT4 crashes after opening demo.arb, choosing ali_16s and launching editor.

Trace in gtkport:

aw_message: 'Can't find SAI:HELIX'
ED4_window.cxx:184: Assertion 'x_link' failed

-------------------- ARB-backtrace 'ARB_SIGSEGV':
/home/epruesse/arb/gtk/lib/libCORE.so(GBK_dump_backtrace(_IO_FILE*, char const*)+0x39)[0x7faeef10db19]
arb_edit4(ED4_window::set_scrolled_rectangle(ED4_base*, ED4_base*, ED4_base*, ED4_base*)+0x56)[0x4fc902]
arb_edit4(ED4_root::create_hierarchy(char*, char*)+0x10dd)[0x4e41c9]
arb_edit4(ARB_main(int, char**)+0x5bb)[0x4c2a0b]
arb_edit4(main+0x20)[0x4a066c]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0xed)[0x7faeed62c76d]
arb_edit4[0x4a0569]
-------------------- End of backtrace
[Terminating with signal 11]
trackers.hxx:113: Assertion 'released' failed

-------------------- ARB-backtrace 'ARB_SIGSEGV':
/home/epruesse/arb/gtk/lib/libCORE.so(GBK_dump_backtrace(_IO_FILE*, char const*)+0x39)[0x7faeef10db19]
arb_edit4(ClientActionTracker::~ClientActionTracker()+0x60)[0x5d382e]
arb_edit4(ClientActionTracker::~ClientActionTracker()+0x18)[0x5d38b8]
/home/epruesse/arb/gtk/lib/libWINDOW.so(AW_root::~AW_root()+0x4b)[0x7faeeeba7973]
/home/epruesse/arb/gtk/lib/libWINDOW.so(+0x977b9)[0x7faeeeba67b9]
/lib/x86_64-linux-gnu/libc.so.6(+0x3b901)[0x7faeed646901]
/lib/x86_64-linux-gnu/libc.so.6(+0x3b985)[0x7faeed646985]
/home/epruesse/arb/gtk/lib/libCORE.so(GBK_install_SIGSEGV_handler(bool)+0x0)[0x7faeef1100dd]
/lib/x86_64-linux-gnu/libc.so.6(+0x364a0)[0x7faeed6414a0]
arb_edit4(provoke_core_dump()+0x10)[0x503772]
arb_edit4(ED4_window::set_scrolled_rectangle(ED4_base*, ED4_base*, ED4_base*, ED4_base*)+0x65)[0x4fc911]
arb_edit4(ED4_root::create_hierarchy(char*, char*)+0x10dd)[0x4e41c9]
arb_edit4(ARB_main(int, char**)+0x5bb)[0x4c2a0b]
arb_edit4(main+0x20)[0x4a066c]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0xed)[0x7faeed62c76d]
arb_edit4[0x4a0569]
-------------------- End of backtrace

Trace in trunk:

-------------------- ARB-backtrace 'received signal 11':
/home/epruesse/arb/trunk/lib/libCORE.so(GBK_dump_backtrace(_IO_FILE*, char const*)+0x34)[0x7f2bc40163c4]
/home/epruesse/arb/trunk/lib/libCORE.so(+0x2c7f7)[0x7f2bc40187f7]
/lib/x86_64-linux-gnu/libc.so.6(+0x364a0)[0x7f2bc28454a0]
arb_edit4(ED4_window::set_scrolled_rectangle(ED4_base*, ED4_base*, ED4_base*, ED4_base*)+0xa2)[0x4a9c82]
arb_edit4(ED4_root::create_hierarchy(char*, char*)+0x9dc)[0x48f65c]
arb_edit4(ARB_main(int, char**)+0x3c4)[0x472684]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0xed)[0x7f2bc283076d]
arb_edit4[0x44f2d5]
-------------------- End of backtrace

Change History (3)

comment:1 follow-up: Changed 10 years ago by westram

  • Owner changed from devel to westram
  • Status changed from new to assigned
  • happens when none of the marked species has data in selected alignment
    • marking VibAlgin + starting editor again works

comment:2 in reply to: ↑ 1 Changed 10 years ago by westram

Replying to westram:

  • happens when none of the marked species has data in selected alignment

Only happens if no (marked) species and no SAI has data.

comment:3 Changed 10 years ago by westram

  • Resolution set to fixed
  • Status changed from assigned to closed

by [11258]

Note: See TracTickets for help on using tickets.