Opened 10 years ago

Closed 10 years ago

Last modified 9 years ago

#571 closed defect (fixed)

arb parsimony does unwanted automatic branchlength calculations

Reported by: westram Owned by: westram
Priority: major Milestone:
Component: ARB_PARSIMONY Version: SVN
Keywords: arb6.0-hotfix Cc: ludwig@…

Description

Reproduce:

  • load tree into parsimony
  • create or rename group

⇒ branchlengths are recalculated

This misbehavior has been introduced by [11126]:

  • since then any tree-mode-command that changes the tree (i.e. everything that sets exports.save) triggers a branchlength calculation. e.g. this also happens when just unfolding a group!
  • any branchlength recalculation also triggers a tree-beautify

TODO

  • use separate triggers for save/recalc (and maybe for beautify as well??)
  • do recalc only after commands in
    • NNI/K.L. mode and
    • MOVE mode

Change History (4)

comment:1 Changed 10 years ago by westram

  • Owner changed from devel to westram
  • Status changed from new to _started

comment:2 Changed 10 years ago by westram

  • Resolution set to fixed
  • Status changed from _started to closed

by [12488]

comment:3 Changed 9 years ago by westram

  • Milestone arb6.1 deleted

already hotfixed into arb 6.0.x series

comment:4 Changed 9 years ago by westram

  • Keywords arb6.0-hotfix added

mark arb6.0.x hotfixes

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