Opened 6 years ago
#794 new enhancement
Taxonomy compare via 'group duplicate search'
Reported by: | westram | Owned by: | devel |
---|---|---|---|
Priority: | normal | Milestone: | proposals |
Component: | ARB_NTREE | Version: | SVN |
Keywords: | Cc: |
Description
Group duplicate search (as implemented in "Search groups" module) could help to compare taxonomies defined by groups in two different topologies:
- for all duplicate clusters containing exactly 2 groups from 2 different trees, a taxonomy mismatch penalty (XMP) could be calculated in the same way as done for "Move groups" (introduced with #780)
- clusters with more than 2 hits cannot be compared due to ambiguous group names (e.g. meaningless for sth like 'uncultured')
- XMP could be used
- to sort results (for taxonomy curation)
- to exclude results from duplicate search (delete and retransfer groups; related #791)
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