../
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awt
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14786
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9 years
|
westram |
* reintegrates 'gde' into 'trunk'
- fixes #695
* adds: …
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awtc
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12396
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11 years
|
westram |
* do not export error from
- arb_look_and_start_server()
- …
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consensus
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14425
|
9 years
|
westram |
* reintegrates 'consensus' into 'trunk'
- fixes #663 (consistent …
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cpro
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11629
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11 years
|
epruesse |
remove "SAI→Other→Positional Variability" feature (decided in #359)
…
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edit4
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15223
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8 years
|
westram |
* reintegrates 'flags' into 'trunk'
- DRYed
* group …
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etc
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6190
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15 years
|
westram |
* removed unused resources
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faligner
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13725
|
10 years
|
westram |
* add config manager to integrated aligners
|
merge
|
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14786
|
9 years
|
westram |
* reintegrates 'gde' into 'trunk'
- fixes #695
* adds: …
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pars
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13625
|
10 years
|
westram |
* reintegrates 'pars' into 'trunk'
- fixes #528, #609, #620, #631, …
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phylo
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14622
|
9 years
|
westram |
* reintegrates 'ui' into 'trunk'
- implements #656
- adds …
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query
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14786
|
9 years
|
westram |
* reintegrates 'gde' into 'trunk'
- fixes #695
* adds: …
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window
|
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8607
|
13 years
|
westram |
merge from e4fix [8135] [8136] [8137] [8138] [8139] [8140] [8141] …
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ad_al_si.fig
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462 bytes
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3298
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20 years
|
westram |
* empty log message *
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ad_align.fig
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1.7 KB
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12754
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10 years
|
westram |
* reintegrates 'alilink' into 'trunk'
- DRYed ali admin(s)
* …
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ad_branch.fig
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1.8 KB
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14622
|
9 years
|
westram |
* reintegrates 'ui' into 'trunk'
- implements #656
- adds …
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ad_cons_tree.fig
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1.0 KB
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8587
|
13 years
|
westram |
* create consensus from gui
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ad_conv.fig
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622 bytes
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14786
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9 years
|
westram |
* reintegrates 'gde' into 'trunk'
- fixes #695
* adds: …
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ad_delof.fig
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838 bytes
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1719
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21 years
|
westram |
updated (to ensure correct window sizes)
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ad_ext.fig
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1.4 KB
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12848
|
10 years
|
westram |
* reintegrates 'fix' into 'trunk'
- removes calls to …
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ad_ext_group.fig
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836 bytes
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12848
|
10 years
|
westram |
* reintegrates 'fix' into 'trunk'
- removes calls to …
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ad_fcrea.fig
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275 bytes
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2
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24 years
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oldcode |
Initial revision
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ad_gen_create.fig
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2.2 KB
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8607
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13 years
|
westram |
merge from e4fix [8135] [8136] [8137] [8138] [8139] [8140] [8141] …
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ad_kreo.fig
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1.1 KB
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7770
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13 years
|
westram |
merge from dev [7679] [7683] [7684] [7685] [7686]
* ARBDB → CORE
…
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ad_one_tree.fig
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604 bytes
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11423
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11 years
|
westram |
* reintegrates '' into 'trunk':
- topology ordering (beautify …
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ad_query.fig
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2.6 KB
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5865
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16 years
|
westram |
* replaced REFRESH button but sort-toggle
- default sort order and …
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ad_selManNam.fig
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971 bytes
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1288
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22 years
|
richter |
belogs to manual selection of valid name
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ad_spec.fig
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1.0 KB
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10444
|
11 years
|
epruesse |
rename buttons in species information window
- DETACH → "New …
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ad_spec_nn.fig
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2.2 KB
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14622
|
9 years
|
westram |
* reintegrates 'ui' into 'trunk'
- implements #656
- adds …
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ad_spec_nnm.fig
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2.1 KB
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14786
|
9 years
|
westram |
* reintegrates 'gde' into 'trunk'
- fixes #695
* adds: …
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ad_tree.fig
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1.8 KB
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8582
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13 years
|
westram |
* added generic subset-selection (refactored from yadhus code in …
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ad_two_trees.fig
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947 bytes
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11423
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11 years
|
westram |
* reintegrates '' into 'trunk':
- topology ordering (beautify …
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arb_intro.fig
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2.6 KB
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6141
|
15 years
|
westram |
* spellchecked all (phew)
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calltexe.fig
|
595 bytes
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2
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24 years
|
oldcode |
Initial revision
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chimera_check.fig
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1.8 KB
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14786
|
9 years
|
westram |
* reintegrates 'gde' into 'trunk'
- fixes #695
* adds: …
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compare_taxonomy.fig
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1.5 KB
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14786
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9 years
|
westram |
* reintegrates 'gde' into 'trunk'
- fixes #695
* adds: …
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concatenate.fig
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1.3 KB
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14087
|
9 years
|
westram |
* deny to use source- as target-alignment in "concat alignments"
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dbbrowser.fig
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1.1 KB
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14025
|
9 years
|
westram |
* reintegrates 'markers' into 'trunk'
* adds:
- …
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di_cancel.fig
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984 bytes
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2
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24 years
|
oldcode |
Initial revision
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di_clusters.fig
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2.1 KB
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12877
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10 years
|
westram |
* reintegrates 'cluster' into 'trunk'
- implements #259
* adds:
…
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di_ge_ma.fig
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3.9 KB
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11278
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11 years
|
westram |
* added two automation toggles to ARB_DIST
- 'Auto recalculate' …
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displayField.fig
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3.2 KB
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14093
|
9 years
|
westram |
* SAI/PROBE match
- 'Select display field' window
* document …
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ed_al_ex.fig
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1.0 KB
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2
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24 years
|
oldcode |
Initial revision
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ed_al_sp.fig
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3.2 KB
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2
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24 years
|
oldcode |
Initial revision
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ed_key.fig
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981 bytes
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13753
|
10 years
|
westram |
* edit4 key mappings
- added config manager
- use 2-column …
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fileselect.fig
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970 bytes
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6223
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15 years
|
westram |
* implemented file selection box (this is the first modal window using …
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gde3item.fig
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2.1 KB
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13704
|
10 years
|
westram |
* add config-managers to all GDE windows
- automatically handles …
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gdeitem.fig
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1.4 KB
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13704
|
10 years
|
westram |
* add config-managers to all GDE windows
- automatically handles …
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gdeitem_simple.fig
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584 bytes
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13704
|
10 years
|
westram |
* add config-managers to all GDE windows
- automatically handles …
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gen_options.fig
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2.6 KB
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14089
|
9 years
|
westram |
* merge 2 genemap property windows
* document genemap properties, …
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help.fig
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923 bytes
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14259
|
9 years
|
westram |
* belongs to [14258]
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insdel.fig
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741 bytes
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9633
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12 years
|
westram |
* reintegrated branch 'sai'
- providing basic insert/delete by SAI
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insdel_sai.fig
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1.6 KB
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13699
|
10 years
|
westram |
* insert/delete by SAI
- added config manager + predefined configs …
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item_shader_cfg.fig
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2.1 KB
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15054
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8 years
|
westram |
* reintegrates 'color' into 'trunk'
- implements #443 (+parts of …
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iupac.fig
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2.4 KB
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14123
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9 years
|
westram |
* merge [14030] + [14032] from 'markers' into 'trunk'
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join_species.fig
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907 bytes
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14786
|
9 years
|
westram |
* reintegrates 'gde' into 'trunk'
- fixes #695
* adds: …
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load_box.fig
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858 bytes
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9797
|
12 years
|
westram |
* reintegrated branch 'merge'
- implements #194
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macro_select.fig
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1.2 KB
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11778
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11 years
|
westram |
* reintegrates 'macros' into 'trunk'
- implements #456
* adds:
…
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mark_configs.fig
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959 bytes
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14025
|
9 years
|
westram |
* reintegrates 'markers' into 'trunk'
* adds:
- …
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merge_species.fig
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850 bytes
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14786
|
9 years
|
westram |
* reintegrates 'gde' into 'trunk'
- fixes #695
* adds: …
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message.fig
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489 bytes
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1719
|
21 years
|
westram |
updated (to ensure correct window sizes)
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mp_results.fig
|
1.7 KB
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8771
|
13 years
|
westram |
* multi probe
- use generic sellist collect buttons
* …
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multiprobe.fig
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2.7 KB
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8771
|
13 years
|
westram |
* multi probe
- use generic sellist collect buttons
* …
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nt_selection.fig
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1.5 KB
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14256
|
9 years
|
westram |
* reintegrates 'config' into 'trunk' (implements #607)
* adds: …
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nt_sort.fig
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924 bytes
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14786
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9 years
|
westram |
* reintegrates 'gde' into 'trunk'
- fixes #695
* adds: …
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optimize.fig
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640 bytes
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12709
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10 years
|
westram |
* button text expanded in [12689]
- did not fit into button
- …
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pd_admin.fig
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1.4 KB
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11060
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11 years
|
westram |
* reintegrates 'ptsfix' into 'trunk':
* adds:
- …
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pd_main.fig
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2.5 KB
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6141
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15 years
|
westram |
* spellchecked all (phew)
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pd_match.fig
|
2.3 KB
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13712
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10 years
|
westram |
* add config manager to probe match
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pd_match_iupac.fig
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926 bytes
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14123
|
9 years
|
westram |
* merge [14030] + [14032] from 'markers' into 'trunk'
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pd_match_probe_collection.fig
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3.0 KB
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13942
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9 years
|
westram |
* added a MODIFY button (replaces selected probe)
* selecting a …
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pd_match_with_specificity.fig
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1.5 KB
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13947
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9 years
|
westram |
* add AUTOMATCH to probe collection
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pd_reslt.fig
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434 bytes
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8762
|
13 years
|
westram |
* load/save for selection lists
- generic code can be configured …
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pd_spec.fig
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2.2 KB
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7987
|
13 years
|
westram |
* support new probe match params introduced in [7986] from ARB_NT …
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pm_spec.fig
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2.3 KB
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8757
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13 years
|
westram |
* probe match no longer calculates different results depending on …
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prd_main.fig
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3.9 KB
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480
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23 years
|
westram |
new button for 'init from gene'
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probeSaiColors.fig
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1.6 KB
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2610
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21 years
|
yadhu |
Changes to Sai Probe Visualization Module
1. Selection of species name …
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proteinViewer.fig
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6.2 KB
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4265
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18 years
|
yadhu |
Changes to ProtView? Module
1. Added REFRESH button to ProtView? Dialog …
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RNA3D_ChangeMolecule.fig
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3.0 KB
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3945
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19 years
|
yadhu |
Changes of RNA3D Module
1. Added New PDB data files for handling large …
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RNA3D_DisplayBases.fig
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4.4 KB
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3639
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20 years
|
yadhu |
Modifications and Addition of Xfig files for RNA3D Module.
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RNA3D_DisplayHelices.fig
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4.6 KB
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3941
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19 years
|
yadhu |
Changes to RNA3D module
1. Now, it can handle Large Subunit rRNA as well.
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RNA3D_DisplayOptions.fig
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4.1 KB
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3639
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20 years
|
yadhu |
Modifications and Addition of Xfig files for RNA3D Module.
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RNA3D_SeqMapping.fig
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5.0 KB
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3940
|
19 years
|
yadhu |
Changes to RNA3D program:
1. Added sychronization of colors with the …
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saiColorRange.fig
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1.5 KB
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4252
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18 years
|
yadhu |
Added "set color" button to VisualizeSAI function.
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save_as.fig
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1.3 KB
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14556
|
9 years
|
westram |
* reintegrates 'dbsave' into 'trunk'
- implements #665
* adds: …
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sec_bonddef.fig
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391 bytes
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4811
|
17 years
|
westram |
- only define x-positions, y calculated now
|
sec_display.fig
|
1.7 KB
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14145
|
9 years
|
westram |
* add scalers to SECEDIT display options
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sec_imexport.fig
|
1.0 KB
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2
|
24 years
|
oldcode |
Initial revision
|
sel_box.fig
|
1.1 KB
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14488
|
9 years
|
westram |
* remove duplicate CLOSE/CANCEL buttons (they only suggest window is …
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sel_box_nds.fig
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1.2 KB
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14488
|
9 years
|
westram |
* remove duplicate CLOSE/CANCEL buttons (they only suggest window is …
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sel_box_tree.fig
|
1.1 KB
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14696
|
9 years
|
westram |
* add missing 'help' label to xfig (fixes #693)
* minor layout fixes
|
sel_box_user.fig
|
1.3 KB
|
8607
|
13 years
|
westram |
merge from e4fix [8135] [8136] [8137] [8138] [8139] [8140] [8141] …
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select_simple.fig
|
383 bytes
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8696
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13 years
|
westram |
* merge from saiali log:branches/saiali@8635-8695
- unalign center …
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seq_quality.fig
|
5.0 KB
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13705
|
10 years
|
westram |
* add config-manager to sequence quality
|
sl_l_box.fig
|
926 bytes
|
8762
|
13 years
|
westram |
* load/save for selection lists
- generic code can be configured …
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sl_s_box.fig
|
1.0 KB
|
8762
|
13 years
|
westram |
* load/save for selection lists
- generic code can be configured …
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stat_main.fig
|
394 bytes
|
2
|
24 years
|
oldcode |
Initial revision
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status.fig
|
852 bytes
|
6050
|
16 years
|
westram |
* removed frame from status window (use 2 points to set size). ARB …
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submiss.fig
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1.2 KB
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1070
|
22 years
|
westram |
added help
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syncscroll.fig
|
613 bytes
|
15340
|
8 years
|
westram |
* reintegrates 'sync' into 'trunk'
- implements #683
* adds: …
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trackali.fig
|
775 bytes
|
4673
|
17 years
|
westram |
- sequence/alignment change tracker
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transdna.fig
|
1.3 KB
|
12667
|
10 years
|
westram |
* reintegrates 'alilink' into 'trunk'
- fixes #419, #145, #563
* …
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transpro.fig
|
1.6 KB
|
2388
|
21 years
|
westram |
toggle to write 'transl_table' and 'codon_start'
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tree_export.fig
|
1.2 KB
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14488
|
9 years
|
westram |
* remove duplicate CLOSE/CANCEL buttons (they only suggest window is …
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visualizeSAI.fig
|
3.8 KB
|
6141
|
15 years
|
westram |
* spellchecked all (phew)
|