source: trunk

Name Size Rev Age Author Last Change
../
AISC 18730   3 years westram * remove trailing whitespace from c source.
AISC_COM 18731   3 years westram * remove generated whitespace. - code generator depended on …
AISC_MKPTPS 18959   3 years westram * reintegrates 'progress' into 'trunk' - implements #789 * adds: …
ARB_GDE 19432   18 months westram * GBT_get_alignment_len - now also reports error if …
ARBDB 19437   18 months westram * fix bogus warning […]
AWT 19495   9 months westram * rename aw_file_selection → aw_modal_file_selection to …
AWTC 19339   2 years westram * reintegrates 'refactor' into 'trunk' - eliminates old interface …
AWTI 19365   19 months westram * string splitters: - unittests for GBT_split_string: …
bin 19355   2 years westram * adds script to detect new field content in marked subset of species …
BINDEP 18437   5 years westram * reintegrates 'io' into 'trunk' * adds: log:branches/io@18428:18436
BINDINGS 18729   3 years westram * eliminate trailing whitespace from Makefiles.
BUGEX 18730   3 years westram * remove trailing whitespace from c source.
CONSENSUS_TREE 18959   3 years westram * reintegrates 'progress' into 'trunk' - implements #789 * adds: …
CONVERTALN 18959   3 years westram * reintegrates 'progress' into 'trunk' - implements #789 * adds: …
CORE 19430   18 months westram * un-inline CharPtrArray::remove to get rid of vectorizer …
DBSERVER 18959   3 years westram * reintegrates 'progress' into 'trunk' - implements #789 * adds: …
DIST 19432   18 months westram * GBT_get_alignment_len - now also reports error if …
doc 6141   15 years westram * spellchecked all (phew)
EDIT4 19495   9 months westram * rename aw_file_selection → aw_modal_file_selection to …
EISPACK 18730   3 years westram * remove trailing whitespace from c source.
etc 6141   15 years westram * spellchecked all (phew)
GDE 19480   17 months westram * reintegrates 'gde' into 'trunk' * adds: log:branches/gde@19460:19479
GDEHELP 19234   2 years westram * reintegrates 'gde' into 'trunk' * adds: log:branches/gde@19228:19233
GENOM 19365   19 months westram * string splitters: - unittests for GBT_split_string: …
GENOM_IMPORT 18959   3 years westram * reintegrates 'progress' into 'trunk' - implements #789 * adds: …
GFX 12766   10 years epruesse attempt at building an icon for ARB databases
GL 19447   17 months westram * suppression of warnings for source-subtrees: - comment + warn …
HEADERLIBS 18634   4 years westram * reintegrates 'root' into 'trunk' - implements #449 * adds: …
HELP_SOURCE 19499   3 months westram * implements #863 * add new ACI command "dupidx" (active in group …
ISLAND_HOPPING 19448   17 months westram * enable + fix warnings in ISLAND_HOPPING.
lib 19489   16 months westram * reintegrates 'macros' into 'trunk' * implements #856 * adds: …
MERGE 19365   19 months westram * string splitters: - unittests for GBT_split_string: …
MULTI_PROBE 19365   19 months westram * string splitters: - unittests for GBT_split_string: …
NALIGNER 19393   19 months westram * reintegrates 'ali' into 'trunk' - refactored misused enum - …
NAMES 18730   3 years westram * remove trailing whitespace from c source.
NAMES_COM 18959   3 years westram * reintegrates 'progress' into 'trunk' - implements #789 * adds: …
NTREE 19499   3 months westram * implements #863 * add new ACI command "dupidx" (active in group …
PARSIMONY 19248   2 years westram * rename GBT_add_new_changekey → …
PERL2ARB 19493   13 months westram * homebrew build looked for wrong lib-suffix. patch from jan. thx :) …
PERL_SCRIPTS 19355   2 years westram * adds script to detect new field content in marked subset of species …
PERLTOOLS 19445   17 months westram * check all A_CC calls (=plain C compilations) whether they are used.
PHYLO 19206   2 years westram * reintegrates 'ali' into 'trunk' * adds: log:branches/ali@19183:19205
PRIMER_DESIGN 19206   2 years westram * reintegrates 'ali' into 'trunk' * adds: log:branches/ali@19183:19205
PROBE 19431   18 months westram * fix NDEBUG warnings (gcc 10.2) - by simplifying …
PROBE_COM 18959   3 years westram * reintegrates 'progress' into 'trunk' - implements #789 * adds: …
PROBE_DESIGN 19365   19 months westram * string splitters: - unittests for GBT_split_string: …
PROBE_SET 18730   3 years westram * remove trailing whitespace from c source.
READSEQ 19452   17 months westram * get rid of tmpnam().
RNA3D 19206   2 years westram * reintegrates 'ali' into 'trunk' * adds: log:branches/ali@19183:19205
RNACMA 19432   18 months westram * GBT_get_alignment_len - now also reports error if …
SECEDIT 19432   18 months westram * GBT_get_alignment_len - now also reports error if …
SEQ_QUALITY 19425   18 months westram * reintegrates 'ali' into 'trunk' - refactorings + fixes related …
SERVERCNTRL 19297   2 years westram * reintegrates 'refactor' into 'trunk' - refactored MULTI_PROBE to …
SH 19494   11 months westram * collection of sysinfo terminated with error - caused by …
SL 19499   3 months westram * implements #863 * add new ACI command "dupidx" (active in group …
SOURCE_TOOLS 19449   17 months westram * shadow-location does appear as warning AND note (depending on gcc …
STAT 19432   18 months westram * GBT_get_alignment_len - now also reports error if …
TEMPLATES 19444   17 months westram * add header (fixes previous commit)
TOOLS 19446   17 months westram * introduce onlyC_flags - flags used for C compilation only. …
TREEGEN 19446   17 months westram * introduce onlyC_flags - flags used for C compilation only. …
UNIT_TESTER 19433   18 months westram * accept duplicate symbols (i.e. symbols with multiple definition …
util 19441   18 months westram * provide source etc. by debian11 buildhost.
WETC 19489   16 months westram * reintegrates 'macros' into 'trunk' * implements #856 * adds: …
WINDOW 19495   9 months westram * rename aw_file_selection → aw_modal_file_selection to …
XML 18725   3 years westram * rename CPP_OBJECTS → OBJECTS.
.gitignore 429 bytes ​ 19245   2 years westram * reintegrates 'sina' into 'trunk' - build/deliver sina together …
arb_CHANGES.txt 26.7 KB ​ 19393   19 months westram * reintegrates 'ali' into 'trunk' - refactored misused enum - …
arb_install.sh 20.7 KB ​ 19266   2 years westram * replace realpath locally in install script - cannot use …
arb_INSTALL.txt 6.0 KB ​ 19492   13 months westram * mention libgomp1 (required by FastTreeMP)
arb_LICENSE.txt 11.0 KB ​ 18697   3 years westram * full update from child 'stable' into 'trunk' - merge changes …
arb_OS_X.txt 5.3 KB ​ 18781   3 years westram * reintegrates 'help' into 'trunk' - relocate help sources * …
arb_OS_X_MacPorts.txt 370 bytes ​ 6288   15 years westram * include ALL arb_*.txt into release tarball * renamed …
arb_PUBLIB_LICENSE.txt 2.2 KB ​ 15367   8 years epruesse revert … misunderstood the meaning of the file name …
arb_README.txt 7.1 KB ​ 18735   3 years westram * fix another obsolete URL
arb_UBUNTU.txt 1.1 KB ​ 19428   18 months westram * add dependencies to make + time. * call apt-get …
arbsrc_README.txt 210 bytes ​ 6288   15 years westram * include ALL arb_*.txt into release tarball * renamed …
arbsrc_README_gcc.txt 2.0 KB ​ 16649   7 years westram * partial merge from 'gcc' into 'trunk' - handles #770 by reducing …
config.makefile.template 1.9 KB ​ 19245   2 years westram * reintegrates 'sina' into 'trunk' - build/deliver sina together …
demo.arb 102.1 KB ​ 16239   7 years westram * change default tree back to first tree
Doxyfile 104.7 KB ​ 17645   6 years westram update doxygen docs: - updated obsolete setting using "doxygen -u". - …
Makefile 87.6 KB ​ 19446   17 months westram * introduce onlyC_flags - flags used for C compilation only. …
README 28 bytes ​ 18702   3 years westram * full update from child 'stable' into 'trunk' * adds: …
  • Property svn:ignore set to
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  • Property svn:mergeinfo set to (toggle deleted branches)
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