source: trunk

Name Size Rev Age Author Last Change
../
AISC 18730   15 months westram * remove trailing whitespace from c source.
AISC_COM 18731   15 months westram * remove generated whitespace. - code generator depended on …
AISC_MKPTPS 18959   9 months westram * reintegrates 'progress' into 'trunk' - implements #789 * adds: …
ARB_GDE 19206   4 months westram * reintegrates 'ali' into 'trunk' * adds: log:branches/ali@19183:19205
ARBDB 19346   3 weeks westram * reintegrates 'refactor' into 'trunk' - polish …
AWT 19339   3 weeks westram * reintegrates 'refactor' into 'trunk' - eliminates old interface …
AWTC 19339   3 weeks westram * reintegrates 'refactor' into 'trunk' - eliminates old interface …
AWTI 19339   3 weeks westram * reintegrates 'refactor' into 'trunk' - eliminates old interface …
bin 19265   3 months westram * script to replace realpath and command -v.
BINDEP 18437   3 years westram * reintegrates 'io' into 'trunk' * adds: log:branches/io@18428:18436
BINDINGS 18729   15 months westram * eliminate trailing whitespace from Makefiles.
BUGEX 18730   15 months westram * remove trailing whitespace from c source.
CONSENSUS_TREE 18959   9 months westram * reintegrates 'progress' into 'trunk' - implements #789 * adds: …
CONVERTALN 18959   9 months westram * reintegrates 'progress' into 'trunk' - implements #789 * adds: …
CORE 19346   3 weeks westram * reintegrates 'refactor' into 'trunk' - polish …
DBSERVER 18959   9 months westram * reintegrates 'progress' into 'trunk' - implements #789 * adds: …
DIST 19283   6 weeks westram * allow to define a separator used to generate clusternames - old …
doc 6141   13 years westram * spellchecked all (phew)
EDIT4 19339   3 weeks westram * reintegrates 'refactor' into 'trunk' - eliminates old interface …
EISPACK 18730   15 months westram * remove trailing whitespace from c source.
etc 6141   13 years westram * spellchecked all (phew)
GDE 19264   3 months westram * configure 'buildinfo' for sina - is shown with version number. …
GDEHELP 19234   4 months westram * reintegrates 'gde' into 'trunk' * adds: log:branches/gde@19228:19233
GENOM 19349   7 days westram * fix mnemonics: - in 'Tree' menu: * p: was used for 'Print …
GENOM_IMPORT 18959   9 months westram * reintegrates 'progress' into 'trunk' - implements #789 * adds: …
GFX 12766   8 years epruesse attempt at building an icon for ARB databases
GL 18730   15 months westram * remove trailing whitespace from c source.
HEADERLIBS 18634   2 years westram * reintegrates 'root' into 'trunk' - implements #449 * adds: …
HELP_SOURCE 19353   3 days westram * added script to delete unlisted trees.
ISLAND_HOPPING 18729   15 months westram * eliminate trailing whitespace from Makefiles.
lib 19354   3 days westram * deny execution.
MERGE 19349   7 days westram * fix mnemonics: - in 'Tree' menu: * p: was used for 'Print …
MULTI_PROBE 19339   3 weeks westram * reintegrates 'refactor' into 'trunk' - eliminates old interface …
NALIGNER 19206   4 months westram * reintegrates 'ali' into 'trunk' * adds: log:branches/ali@19183:19205
NAMES 18730   15 months westram * remove trailing whitespace from c source.
NAMES_COM 18959   9 months westram * reintegrates 'progress' into 'trunk' - implements #789 * adds: …
NTREE 19349   7 days westram * fix mnemonics: - in 'Tree' menu: * p: was used for 'Print …
PARSIMONY 19248   3 months westram * rename GBT_add_new_changekey → …
PERL2ARB 19047   7 months westram * partial merge from 'sina' into 'trunk' - fixes for ubuntu 10.04 …
PERL_SCRIPTS 18781   14 months westram * reintegrates 'help' into 'trunk' - relocate help sources * …
PERLTOOLS 19339   3 weeks westram * reintegrates 'refactor' into 'trunk' - eliminates old interface …
PHYLO 19206   4 months westram * reintegrates 'ali' into 'trunk' * adds: log:branches/ali@19183:19205
PRIMER_DESIGN 19206   4 months westram * reintegrates 'ali' into 'trunk' * adds: log:branches/ali@19183:19205
PROBE 19346   3 weeks westram * reintegrates 'refactor' into 'trunk' - polish …
PROBE_COM 18959   9 months westram * reintegrates 'progress' into 'trunk' - implements #789 * adds: …
PROBE_DESIGN 19349   7 days westram * fix mnemonics: - in 'Tree' menu: * p: was used for 'Print …
PROBE_SET 18730   15 months westram * remove trailing whitespace from c source.
READSEQ 18729   15 months westram * eliminate trailing whitespace from Makefiles.
RNA3D 19206   4 months westram * reintegrates 'ali' into 'trunk' * adds: log:branches/ali@19183:19205
RNACMA 19206   4 months westram * reintegrates 'ali' into 'trunk' * adds: log:branches/ali@19183:19205
SECEDIT 19339   3 weeks westram * reintegrates 'refactor' into 'trunk' - eliminates old interface …
SEQ_QUALITY 19206   4 months westram * reintegrates 'ali' into 'trunk' * adds: log:branches/ali@19183:19205
SERVERCNTRL 19297   4 weeks westram * reintegrates 'refactor' into 'trunk' - refactored MULTI_PROBE to …
SH 19285   5 weeks westram * again update prerequisites: use libxerces-c-dev * also use changed …
SL 19346   3 weeks westram * reintegrates 'refactor' into 'trunk' - polish …
SOURCE_TOOLS 19276   6 weeks westram * add class MessageSpamFilter - helps suppressing too many …
STAT 19339   3 weeks westram * reintegrates 'refactor' into 'trunk' - eliminates old interface …
TEMPLATES 19167   5 months westram * reintegrates 'split' into 'trunk' * adds: …
TOOLS 19339   3 weeks westram * reintegrates 'refactor' into 'trunk' - eliminates old interface …
TREEGEN 18724   15 months westram * directly use OBJECTS.
UNIT_TESTER 19339   3 weeks westram * reintegrates 'refactor' into 'trunk' - eliminates old interface …
util 19251   3 months westram * do NOT pack eventually installed fat-sina into normal arb-tarball.
WETC 18959   9 months westram * reintegrates 'progress' into 'trunk' - implements #789 * adds: …
WINDOW 19339   3 weeks westram * reintegrates 'refactor' into 'trunk' - eliminates old interface …
XML 18725   15 months westram * rename CPP_OBJECTSOBJECTS.
.gitignore 429 bytes 19245   3 months westram * reintegrates 'sina' into 'trunk' - build/deliver sina together …
arb_CHANGES.txt 26.4 KB 19245   3 months westram * reintegrates 'sina' into 'trunk' - build/deliver sina together …
arb_install.sh 20.7 KB 19266   3 months westram * replace realpath locally in install script - cannot use …
arb_INSTALL.txt 6.0 KB 19285   5 weeks westram * again update prerequisites: use libxerces-c-dev * also use changed …
arb_LICENSE.txt 11.0 KB 18697   15 months westram * full update from child 'stable' into 'trunk' - merge changes …
arb_OS_X.txt 5.3 KB 18781   14 months westram * reintegrates 'help' into 'trunk' - relocate help sources * …
arb_OS_X_MacPorts.txt 370 bytes 6288   13 years westram * include ALL arb_*.txt into release tarball * renamed …
arb_PUBLIB_LICENSE.txt 2.2 KB 15367   6 years epruesse revert … misunderstood the meaning of the file name …
arb_README.txt 7.1 KB 18735   15 months westram * fix another obsolete URL
arb_UBUNTU.txt 1.0 KB 19043   7 months westram * only check for makedepend when dependencies are updated (not …
arbsrc_README.txt 210 bytes 6288   13 years westram * include ALL arb_*.txt into release tarball * renamed …
arbsrc_README_gcc.txt 2.0 KB 16649   5 years westram * partial merge from 'gcc' into 'trunk' - handles #770 by reducing …
config.makefile.template 1.9 KB 19245   3 months westram * reintegrates 'sina' into 'trunk' - build/deliver sina together …
demo.arb 102.1 KB 16239   5 years westram * change default tree back to first tree
Doxyfile 104.7 KB 17645   4 years westram update doxygen docs: - updated obsolete setting using "doxygen -u". - …
Makefile 87.4 KB 19339   3 weeks westram * reintegrates 'refactor' into 'trunk' - eliminates old interface …
README 28 bytes 18702   15 months westram * full update from child 'stable' into 'trunk' * adds: …
  • Property svn:ignore set to
    *.last_gcc
    ARB_SOURCE_DOC
    ChangeLog
    INCLUDE
    PERL5
    arb.tgz
    arbsrc.lst
    arbsrc_*.tgz
    compile.log
    config.makefile
    do_core
    TAGS
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    *.last_compiler
    TAGS*.tmp
    .git
    current.patch
    staged.patch
    unstaged.patch
    build.log
    arb-sina-fat.tgz
  • Property svn:mergeinfo set to (toggle deleted branches)
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