source: trunk

Name Size Rev Age Author Last Change
../
AISC 18730   4 years westram * remove trailing whitespace from c source.
AISC_COM 18731   4 years westram * remove generated whitespace. - code generator depended on …
AISC_MKPTPS 18959   4 years westram * reintegrates 'progress' into 'trunk' - implements #789 * adds: …
ARB_GDE 19549   2 days westram * reintegrates 'sync' into 'trunk' - fixes #869 * introduces …
ARBDB 19549   2 days westram * reintegrates 'sync' into 'trunk' - fixes #869 * introduces …
AWT 19549   2 days westram * reintegrates 'sync' into 'trunk' - fixes #869 * introduces …
AWTC 19339   3 years westram * reintegrates 'refactor' into 'trunk' - eliminates old interface …
AWTI 19500   9 months westram * rename GBT_create_alignment → GBT_create_new_alignment. …
bin 19549   2 days westram * reintegrates 'sync' into 'trunk' - fixes #869 * introduces …
BINDEP 19549   2 days westram * reintegrates 'sync' into 'trunk' - fixes #869 * introduces …
BINDINGS 18729   4 years westram * eliminate trailing whitespace from Makefiles.
BUGEX 18730   4 years westram * remove trailing whitespace from c source.
CONSENSUS_TREE 18959   4 years westram * reintegrates 'progress' into 'trunk' - implements #789 * adds: …
CONVERTALN 19505   5 months westram * fix constexpr issues for compilation under OSX 15
CORE 19508   3 months westram * fix TEST_diff_files() (failing under some conditions) - …
DBSERVER 18959   4 years westram * reintegrates 'progress' into 'trunk' - implements #789 * adds: …
DIST 19432   2 years westram * GBT_get_alignment_len - now also reports error if …
doc 6141   16 years westram * spellchecked all (phew)
EDIT4 19549   2 days westram * reintegrates 'sync' into 'trunk' - fixes #869 * introduces …
EISPACK 18730   4 years westram * remove trailing whitespace from c source.
etc 6141   16 years westram * spellchecked all (phew)
GDE 19549   2 days westram * reintegrates 'sync' into 'trunk' - fixes #869 * introduces …
GDEHELP 19532   3 months westram * reintegrates 'help' into 'trunk' - tweak arb documentation: …
GENOM 19504   7 months westram * also add buttons to experiment and genes search.
GENOM_IMPORT 18959   4 years westram * reintegrates 'progress' into 'trunk' - implements #789 * adds: …
GFX 12766   11 years epruesse attempt at building an icon for ARB databases
GL 19447   2 years westram * suppression of warnings for source-subtrees: - comment + warn …
HEADERLIBS 18634   5 years westram * reintegrates 'root' into 'trunk' - implements #449 * adds: …
HELP_SOURCE 19549   2 days westram * reintegrates 'sync' into 'trunk' - fixes #869 * introduces …
ISLAND_HOPPING 19448   2 years westram * enable + fix warnings in ISLAND_HOPPING.
lib 19534   7 weeks westram * tweaks Track alignment changes: - automatically adds …
MERGE 19365   2 years westram * string splitters: - unittests for GBT_split_string: …
MULTI_PROBE 19365   2 years westram * string splitters: - unittests for GBT_split_string: …
NALIGNER 19393   2 years westram * reintegrates 'ali' into 'trunk' - refactored misused enum - …
NAMES 18730   4 years westram * remove trailing whitespace from c source.
NAMES_COM 18959   4 years westram * reintegrates 'progress' into 'trunk' - implements #789 * adds: …
NTREE 19549   2 days westram * reintegrates 'sync' into 'trunk' - fixes #869 * introduces …
PARSIMONY 19532   3 months westram * reintegrates 'help' into 'trunk' - tweak arb documentation: …
PERL2ARB 19493   2 years westram * homebrew build looked for wrong lib-suffix. patch from jan. thx :) …
PERL_SCRIPTS 19512   3 months westram * fix wrong group counts (slighly too many for some DBs).
PERLTOOLS 19445   2 years westram * check all A_CC calls (=plain C compilations) whether they are used.
PHYLO 19206   3 years westram * reintegrates 'ali' into 'trunk' * adds: log:branches/ali@19183:19205
PRIMER_DESIGN 19206   3 years westram * reintegrates 'ali' into 'trunk' * adds: log:branches/ali@19183:19205
PROBE 19431   2 years westram * fix NDEBUG warnings (gcc 10.2) - by simplifying …
PROBE_COM 18959   4 years westram * reintegrates 'progress' into 'trunk' - implements #789 * adds: …
PROBE_DESIGN 19551   44 hours westram * add missing dependency: PROBE_DESIGN→SL/MACROS.
PROBE_SET 18730   4 years westram * remove trailing whitespace from c source.
READSEQ 19452   2 years westram * get rid of tmpnam().
RNA3D 19206   3 years westram * reintegrates 'ali' into 'trunk' * adds: log:branches/ali@19183:19205
RNACMA 19432   2 years westram * GBT_get_alignment_len - now also reports error if …
SECEDIT 19432   2 years westram * GBT_get_alignment_len - now also reports error if …
SEQ_QUALITY 19425   2 years westram * reintegrates 'ali' into 'trunk' - refactorings + fixes related …
SERVERCNTRL 19297   3 years westram * reintegrates 'refactor' into 'trunk' - refactored MULTI_PROBE to …
SH 19549   2 days westram * reintegrates 'sync' into 'trunk' - fixes #869 * introduces …
SL 19549   2 days westram * reintegrates 'sync' into 'trunk' - fixes #869 * introduces …
SOURCE_TOOLS 19551   44 hours westram * add missing dependency: PROBE_DESIGN→SL/MACROS.
STAT 19432   2 years westram * GBT_get_alignment_len - now also reports error if …
TEMPLATES 19549   2 days westram * reintegrates 'sync' into 'trunk' - fixes #869 * introduces …
TOOLS 19549   2 days westram * reintegrates 'sync' into 'trunk' - fixes #869 * introduces …
TREEGEN 19446   2 years westram * introduce onlyC_flags - flags used for C compilation only. …
UNIT_TESTER 19532   3 months westram * reintegrates 'help' into 'trunk' - tweak arb documentation: …
util 19532   3 months westram * reintegrates 'help' into 'trunk' - tweak arb documentation: …
WETC 19489   2 years westram * reintegrates 'macros' into 'trunk' * implements #856 * adds: …
WINDOW 19549   2 days westram * reintegrates 'sync' into 'trunk' - fixes #869 * introduces …
XML 19532   3 months westram * reintegrates 'help' into 'trunk' - tweak arb documentation: …
.gitignore 429 bytes ​ 19245   3 years westram * reintegrates 'sina' into 'trunk' - build/deliver sina together …
arb_CHANGES.txt 26.7 KB ​ 19532   3 months westram * reintegrates 'help' into 'trunk' - tweak arb documentation: …
arb_install.sh 20.7 KB ​ 19266   3 years westram * replace realpath locally in install script - cannot use …
arb_INSTALL.txt 6.0 KB ​ 19492   2 years westram * mention libgomp1 (required by FastTreeMP)
arb_LICENSE.txt 11.0 KB ​ 18697   4 years westram * full update from child 'stable' into 'trunk' - merge changes …
arb_OS_X.txt 5.3 KB ​ 18781   4 years westram * reintegrates 'help' into 'trunk' - relocate help sources * …
arb_OS_X_MacPorts.txt 370 bytes ​ 6288   16 years westram * include ALL arb_*.txt into release tarball * renamed …
arb_PUBLIB_LICENSE.txt 2.2 KB ​ 15367   9 years epruesse revert … misunderstood the meaning of the file name …
arb_README.txt 7.1 KB ​ 18735   4 years westram * fix another obsolete URL
arb_UBUNTU.txt 1.1 KB ​ 19428   2 years westram * add dependencies to make + time. * call apt-get …
arbsrc_README.txt 210 bytes ​ 6288   16 years westram * include ALL arb_*.txt into release tarball * renamed …
arbsrc_README_gcc.txt 2.0 KB ​ 16649   8 years westram * partial merge from 'gcc' into 'trunk' - handles #770 by reducing …
config.makefile.template 1.9 KB ​ 19245   3 years westram * reintegrates 'sina' into 'trunk' - build/deliver sina together …
demo.arb 102.1 KB ​ 16239   8 years westram * change default tree back to first tree
Doxyfile 104.7 KB ​ 17645   7 years westram update doxygen docs: - updated obsolete setting using "doxygen -u". - …
Makefile 87.9 KB ​ 19507   3 months westram * avoid building arb as root: - may cause test failures …
README 28 bytes ​ 18702   4 years westram * full update from child 'stable' into 'trunk' * adds: …
  • Property svn:ignore set to
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    ChangeLog
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    unstaged.patch
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  • Property svn:mergeinfo set to (toggle deleted branches)
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