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../
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AISC
|
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8324
|
6 weeks
|
westram:
- clang-fix: explicitely pass language type to compiler when .c is …
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AISC_COM
|
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8314
|
7 weeks
|
westram:
* removed AISC debug code
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AISC_MKPTPS
|
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8309
|
7 weeks
|
westram:
* moved much code into static scope
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ARB_GDE
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8359
|
2 days
|
westram:
* added 'Never ask again' switch to most modal question dialogs. This is a …
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ARBDB
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8363
|
29 hours
|
westram:
* property file loading
- missing fallback for 'Save loaded …
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AWT
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8361
|
33 hours
|
westram:
* cosmetic questions changes
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AWTC
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8313
|
7 weeks
|
westram:
* removed dead code
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AWTI
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8359
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2 days
|
westram:
* added 'Never ask again' switch to most modal question dialogs. This is a …
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bin
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7983
|
4 months
|
westram:
- ignore link to collect_gene_info.pl
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BINDEP
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8273
|
2 months
|
westram:
- removed dead ALIV3
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BUGEX
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7044
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16 months
|
westram:
* fixed include wrappers (merges [7006] [7007])
- use gcc-style …
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CONSENSUS_TREE
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8313
|
7 weeks
|
westram:
* removed dead code
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CONVERTALN
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8309
|
7 weeks
|
westram:
* moved much code into static scope
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CORE
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8313
|
7 weeks
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westram:
* removed dead code
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DBSERVER
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8246
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2 months
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westram:
* eliminated several main()'s from lib/obj-code
- replaced by ARB_main …
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DIST
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8360
|
33 hours
|
westram:
* renamed menu separator functions
* removed macro AWMIMT
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doc
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6141
|
2 years
|
westram:
* spellchecked all (phew)
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|
EDIT4
|
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8363
|
29 hours
|
westram:
* property file loading
- missing fallback for 'Save loaded …
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EISPACK
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7803
|
6 months
|
westram:
merge from dev [7716] [7732] [7733] [7734] [7735]
* script to add+remove …
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etc
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6141
|
2 years
|
westram:
* spellchecked all (phew)
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GDE
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8240
|
2 months
|
westram:
- patch for ubuntu 11.10 oneiric / gcc 4.6.1 (thx to Kai)
* dont link …
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GDEHELP
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8205
|
3 months
|
westram:
merge from stable_5.0 [8203]
* removed molphy (protml)
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GENOM
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8360
|
33 hours
|
westram:
* renamed menu separator functions
* removed macro AWMIMT
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GENOM_IMPORT
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8251
|
2 months
|
westram:
- removed using decls from headers
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GL
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8313
|
7 weeks
|
westram:
* removed dead code
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HEADERLIBS
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7895
|
5 months
|
westram:
* added arb_rnacma (correlated mutation analysis) written by Breno Faria
…
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HELP_SOURCE
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8309
|
7 weeks
|
westram:
* moved much code into static scope
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ISLAND_HOPPING
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8309
|
7 weeks
|
westram:
* moved much code into static scope
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lib
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8056
|
4 months
|
westram:
* fixed undefined AWAR_CANIO_BORDERSIZE in canvas_to_xfig
- instead …
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MERGE
|
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8360
|
33 hours
|
westram:
* renamed menu separator functions
* removed macro AWMIMT
|
|
MULTI_PROBE
|
|
8313
|
7 weeks
|
westram:
* removed dead code
|
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NALIGNER
|
|
8313
|
7 weeks
|
westram:
* removed dead code
|
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NAMES
|
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8309
|
7 weeks
|
westram:
* moved much code into static scope
|
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NAMES_COM
|
|
8324
|
6 weeks
|
westram:
- clang-fix: explicitely pass language type to compiler when .c is …
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|
NTREE
|
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8360
|
33 hours
|
westram:
* renamed menu separator functions
* removed macro AWMIMT
|
|
PARSIMONY
|
|
8360
|
33 hours
|
westram:
* renamed menu separator functions
* removed macro AWMIMT
|
|
PERL2ARB
|
|
8312
|
7 weeks
|
westram:
- corrected refs wrong since [7781]
|
|
PERL_SCRIPTS
|
|
8319
|
7 weeks
|
westram:
* ignored PERL2ARB interface as referrer (to detect functions that are …
|
|
PERLTOOLS
|
|
7819
|
6 months
|
westram:
merge from dev [7774] [7778] [7779] [7780] [7781] [7782] [7783] [7784] …
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PGT
|
|
8313
|
7 weeks
|
westram:
* removed dead code
|
|
PHYLO
|
|
8360
|
33 hours
|
westram:
* renamed menu separator functions
* removed macro AWMIMT
|
|
PRIMER_DESIGN
|
|
8359
|
2 days
|
westram:
* added 'Never ask again' switch to most modal question dialogs. This is a …
|
|
PROBE
|
|
8313
|
7 weeks
|
westram:
* removed dead code
|
|
PROBE_COM
|
|
8324
|
6 weeks
|
westram:
- clang-fix: explicitely pass language type to compiler when .c is …
|
|
PROBE_DESIGN
|
|
8359
|
2 days
|
westram:
* added 'Never ask again' switch to most modal question dialogs. This is a …
|
|
PROBE_SET
|
|
8313
|
7 weeks
|
westram:
* removed dead code
|
|
ptpan
|
|
7935
|
5 months
|
westram:
- removed outdated ptpan
|
|
READSEQ
|
|
7803
|
6 months
|
westram:
merge from dev [7716] [7732] [7733] [7734] [7735]
* script to add+remove …
|
|
RNA3D
|
|
8309
|
7 weeks
|
westram:
* moved much code into static scope
|
|
RNACMA
|
|
8322
|
6 weeks
|
westram:
- clang-fix: replace auto-arrays of non-POD types by dynamic memory
|
|
SECEDIT
|
|
8360
|
33 hours
|
westram:
* renamed menu separator functions
* removed macro AWMIMT
|
|
SEQ_QUALITY
|
|
8313
|
7 weeks
|
westram:
* removed dead code
|
|
SERVERCNTRL
|
|
8309
|
7 weeks
|
westram:
* moved much code into static scope
|
|
SH
|
|
8241
|
2 months
|
westram:
- use libmotif4
- changed way to add the ARB repository to sources.lst
|
|
SL
|
|
8361
|
33 hours
|
westram:
* cosmetic questions changes
|
|
SOURCE_TOOLS
|
|
8360
|
33 hours
|
westram:
* renamed menu separator functions
* removed macro AWMIMT
|
|
STAT
|
|
8309
|
7 weeks
|
westram:
* moved much code into static scope
|
|
TEMPLATES
|
|
8325
|
6 weeks
|
westram:
- clang-fix: accept version 4.2 when compiling with clang
|
|
TOOLS
|
|
8309
|
7 weeks
|
westram:
* moved much code into static scope
|
|
TREEGEN
|
|
8249
|
2 months
|
westram:
* wrap main for untested (but testable) units
- still untestable
…
|
|
UNIT_TESTER
|
|
8352
|
3 days
|
westram:
- change result expected by unit-test (according to [8351])
|
|
util
|
|
8041
|
4 months
|
westram:
merge from dev [7990] [7991] [7992] [7993] [7994] [7995] [7996] [7998] …
|
|
WETC
|
|
8249
|
2 months
|
westram:
* wrap main for untested (but testable) units
- still untestable
…
|
|
WINDOW
|
|
8360
|
33 hours
|
westram:
* renamed menu separator functions
* removed macro AWMIMT
|
|
XML
|
|
7803
|
6 months
|
westram:
merge from dev [7716] [7732] [7733] [7734] [7735]
* script to add+remove …
|
|
XML_IMPORT
|
|
7811
|
6 months
|
westram:
merge from dev [7748] [7749] [7750]
* comments (C->C++ style)
* fixed …
|
|
arb_CHANGES.txt
|
10.4 KB |
6774
|
17 months
|
westram:
- merged changelog from stable (all changes are already in trunk)
|
|
arb_DEBUG.txt
|
1.2 KB |
578
|
10 years
|
westram:
*** empty log message ***
|
|
arb_install.sh
|
14.3 KB |
6350
|
2 years
|
westram:
- accept arb.tgz as file (not only as link). Needed if you install ARB …
|
|
arb_INSTALL.txt
|
3.7 KB |
8283
|
2 months
|
westram:
- compile on suse 12.1
|
|
arb_LICENSE.txt
|
10.7 KB |
8205
|
3 months
|
westram:
merge from stable_5.0 [8203]
* removed molphy (protml)
|
|
arb_OS_X.txt
|
5.5 KB |
6214
|
2 years
|
westram:
- updated OS_X info (thx to Matt)
|
|
arb_OS_X_MacPorts.txt
|
370 bytes |
6288
|
2 years
|
westram:
* include ALL arb_*.txt into release tarball
* renamed arb_README_gcc.txt …
|
|
arb_README.txt
|
5.9 KB |
8212
|
3 months
|
westram:
merge from stable_5.0 [8207] [8210] [8211]
* refer to ubuntu 10.04 …
|
|
arb_UBUNTU.txt
|
1.2 KB |
8212
|
3 months
|
westram:
merge from stable_5.0 [8207] [8210] [8211]
* refer to ubuntu 10.04 …
|
|
arbsrc_README.txt
|
210 bytes |
6288
|
2 years
|
westram:
* include ALL arb_*.txt into release tarball
* renamed arb_README_gcc.txt …
|
|
arbsrc_README_gcc.txt
|
2.1 KB |
7331
|
11 months
|
westram:
- tested and added gcc 4.5.2
|
|
config.makefile.template
|
1.6 KB |
7337
|
11 months
|
westram:
* possibility to toggle the TODO-warnings via config.makefile
|
|
demo.arb
|
78.9 KB |
7664
|
8 months
|
westram:
* merge from dev [7509] [7510] [7511] [7514] [7517] [7520] [7524] [7527]
…
|
|
Doxyfile
|
62.2 KB |
6864
|
17 months
|
westram:
* doxygen (merges [6852] [6854] [6857] from refactor)
- workaround …
|
|
Makefile
|
56.7 KB |
8327
|
6 weeks
|
westram:
- clang static analyzer working
|
|
README
|
0.7 KB |
5390
|
4 years
|
westram:
- TAB-Ex
|