source: trunk

Name Size Rev Age Author Last Change
../
AISC 17877   6 months westram * reintegrates 'gcc' into 'trunk' * adds: log:branches/gcc@17850:17876
AISC_COM 17618   12 months westram * full update from child 'fix' into 'trunk' - fixes undefined …
AISC_MKPTPS 17634   8 months westram * reintegrates 'mix' into 'trunk' * prepare arb for hybrid svn/git …
ARB_GDE 18159   5 weeks westram * full update from child 'fix' into 'trunk' - fix item name …
ARBDB 18208   3 days westram * full update from child 'fix' into 'trunk' - finish tests …
AWT 18159   5 weeks westram * full update from child 'fix' into 'trunk' - fix item name …
AWTC 16766   2 years westram * reintegrates 'gcc' into 'trunk' - mostly cosmetics changes * …
AWTI 18159   5 weeks westram * full update from child 'fix' into 'trunk' - fix item name …
bin 18120   7 weeks westram * add new target 'cleanRelinkable': - removes libs, executables + …
BINDEP 16919   19 months westram * reintegrates 'pvp' into 'trunk' - adds arb_calc_pvp (CLI …
BINDINGS 17655   8 months westram * adds: [17654/branches/fts] - commit went into wrong branch
BUGEX 17651   8 months westram * reintegrates 'cleanup' into 'trunk' * adds: …
CONSENSUS_TREE 17478   13 months westram * reintegrates 'svalues' into 'trunk' - implements #614 * adds: …
CONVERTALN 18100   8 weeks westram * mark loop failing with 4.9.2
CORE 18159   5 weeks westram * full update from child 'fix' into 'trunk' - fix item name …
DBSERVER 17953   4 months westram * fix number of tabs between key and data (ASCII DB format) - …
DIST 18159   5 weeks westram * full update from child 'fix' into 'trunk' - fix item name …
doc 6141   10 years westram * spellchecked all (phew)
EDIT4 18159   5 weeks westram * full update from child 'fix' into 'trunk' - fix item name …
EISPACK 13443   5 years westram * reintegrates 'vectorize' into 'trunk' - adds vectorization check …
etc 6141   10 years westram * spellchecked all (phew)
GDE 18140   6 weeks westram * full update from child 'fix' into 'trunk' - improve target …
GDEHELP 17634   8 months westram * reintegrates 'mix' into 'trunk' * prepare arb for hybrid svn/git …
GENOM 18194   13 days westram * full update from child 'fix' into 'trunk' * adds: …
GENOM_IMPORT 18088   8 weeks westram * reintegrates 'fts' into 'trunk' * adds: - …
GFX 12766   5 years epruesse attempt at building an icon for ARB databases
GL 16961   19 months westram * partial merge from 'fix' into 'trunk' - refactored …
HEADERLIBS 17634   8 months westram * reintegrates 'mix' into 'trunk' * prepare arb for hybrid svn/git …
HELP_SOURCE 18186   2 weeks westram * reintegrates 'fts' into 'trunk' * adds: log:branches/fts@18177:18185
ISLAND_HOPPING 16763   2 years westram * partial merge from 'gcc' into 'trunk' - use nullptr in …
lib 18186   2 weeks westram * reintegrates 'fts' into 'trunk' * adds: log:branches/fts@18177:18185
MERGE 18159   5 weeks westram * full update from child 'fix' into 'trunk' - fix item name …
MULTI_PROBE 18159   5 weeks westram * full update from child 'fix' into 'trunk' - fix item name …
NALIGNER 17982   4 months westram * reduced use of GB_change_my_security: - use GB_securityLevel …
NAMES 16766   2 years westram * reintegrates 'gcc' into 'trunk' - mostly cosmetics changes * …
NAMES_COM 17634   8 months westram * reintegrates 'mix' into 'trunk' * prepare arb for hybrid svn/git …
NTREE 18208   3 days westram * full update from child 'fix' into 'trunk' - finish tests …
PARSIMONY 18159   5 weeks westram * full update from child 'fix' into 'trunk' - fix item name …
PERL2ARB 17634   8 months westram * reintegrates 'mix' into 'trunk' * prepare arb for hybrid svn/git …
PERL_SCRIPTS 17618   12 months westram * full update from child 'fix' into 'trunk' - fixes undefined …
PERLTOOLS 16766   2 years westram * reintegrates 'gcc' into 'trunk' - mostly cosmetics changes * …
PHYLO 18159   5 weeks westram * full update from child 'fix' into 'trunk' - fix item name …
PRIMER_DESIGN 17724   7 months westram * partial merge from 'fts' into 'trunk' - ConfigMapping: …
PROBE 18159   5 weeks westram * full update from child 'fix' into 'trunk' - fix item name …
PROBE_COM 17989   4 months westram * change names of related variables in ptserver.
PROBE_DESIGN 18194   13 days westram * full update from child 'fix' into 'trunk' * adds: …
PROBE_SET 18140   6 weeks westram * full update from child 'fix' into 'trunk' - improve target …
ptpan 13443   5 years westram * reintegrates 'vectorize' into 'trunk' - adds vectorization check …
READSEQ 15411   3 years westram * fix warnings caused by converted documentation - conversion of …
RNA3D 18194   13 days westram * full update from child 'fix' into 'trunk' * adds: …
RNACMA 18159   5 weeks westram * full update from child 'fix' into 'trunk' - fix item name …
SECEDIT 18194   13 days westram * full update from child 'fix' into 'trunk' * adds: …
SEQ_QUALITY 17724   7 months westram * partial merge from 'fts' into 'trunk' - ConfigMapping: …
SERVERCNTRL 17377   14 months westram * do not use &>> (unknown by older bash versions)
SH 18102   8 weeks westram * remove libxerces-c3.2 dependency (invalid for 14.04)
SL 18211   3 days westram * add new QUERY_ITEM_TYPE for organisms: QUERY_ITEM_ORGANISM
SOURCE_TOOLS 18168   5 weeks westram * full update from child 'fix' into 'trunk' * adds: …
STAT 17724   7 months westram * partial merge from 'fts' into 'trunk' - ConfigMapping: …
TEMPLATES 18159   5 weeks westram * full update from child 'fix' into 'trunk' - fix item name …
TOOLS 18159   5 weeks westram * full update from child 'fix' into 'trunk' - fix item name …
TREEGEN 16766   2 years westram * reintegrates 'gcc' into 'trunk' - mostly cosmetics changes * …
UNIT_TESTER 18159   5 weeks westram * full update from child 'fix' into 'trunk' - fix item name …
util 18123   7 weeks westram - call 'cleanRelinkable' when done with build
WETC 16763   2 years westram * partial merge from 'gcc' into 'trunk' - use nullptr in …
WINDOW 18194   13 days westram * full update from child 'fix' into 'trunk' * adds: …
XML 16763   2 years westram * partial merge from 'gcc' into 'trunk' - use nullptr in …
XML_IMPORT 16766   2 years westram * reintegrates 'gcc' into 'trunk' - mostly cosmetics changes * …
.gitignore 413 bytes 17751   7 months westram * ignore Makefile.old
arb_CHANGES.txt 24.1 KB 18148   5 weeks westram * update
arb_install.sh 14.4 KB 17114   17 months westram * only refer to /etc/bash.bashrc (for global alias) * add …
arb_INSTALL.txt 4.6 KB 16437   2 years westram * ignore failures in target 'rmbak' - they occur with 12+ cpus; …
arb_LICENSE.txt 11.1 KB 15365   3 years westram * allow use of selected parts of arb source in GPL licensed projects
arb_OS_X.txt 5.3 KB 17742   7 months westram * fix unnecessary typos.
arb_OS_X_MacPorts.txt 370 bytes 6288   10 years westram * include ALL arb_*.txt into release tarball * renamed …
arb_PUBLIB_LICENSE.txt 2.2 KB 15367   3 years epruesse revert … misunderstood the meaning of the file name …
arb_README.txt 7.9 KB 18128   6 weeks westram * reintegrates 'fix' into 'trunk' - effectively merges [17619] * …
arb_UBUNTU.txt 1.4 KB 17624   9 months epruesse Add xerces-c-dev to ubuntu build deps
arbsrc_README.txt 210 bytes 6288   10 years westram * include ALL arb_*.txt into release tarball * renamed …
arbsrc_README_gcc.txt 2.0 KB 16649   2 years westram * partial merge from 'gcc' into 'trunk' - handles #770 by reducing …
config.makefile.template 1.6 KB 17738   7 months westram * reintegrates 'config' into 'trunk' * adds: …
demo.arb 102.1 KB 16239   2 years westram * change default tree back to first tree
Doxyfile 104.7 KB 17645   8 months westram update doxygen docs: - updated obsolete setting using "doxygen -u". - …
Makefile 81.1 KB 18168   5 weeks westram * full update from child 'fix' into 'trunk' * adds: …
README 717 bytes 5390   11 years westram - TAB-Ex
  • Property svn:ignore set to
    *.last_gcc
    ARB_SOURCE_DOC
    ChangeLog
    INCLUDE
    PERL5
    arb.tgz
    arbsrc.lst
    arbsrc_*.tgz
    compile.log
    config.makefile
    do_core
    TAGS
    .cdtproject
    .project
    .settings
    arbsrc.tgz
    *.bak
    arb_time.log
    patches.arb
    makeloc.here
    nbproject
    *.last_compiler
    arb-dev.tgz
    TAGS*.tmp
    .git
    current.patch
    staged.patch
    unstaged.patch
  • Property svn:mergeinfo set to (toggle deleted branches)
    /branches/alilink11490-11577,​12419-12666,​12669-12705,​12708-12753,​12782,​12786-12787,​12801-12802,​12854,​12856-12865,​12867,​13999-14000,​14004
    /branches/fix11579-11625,​11890-11901,​11904-11910,​11985-11997,​12008-12013,​12023-12042,​12049-12053,​12058-12137,​12147-12156,​12445-12456,​12806-12833,​12839-12847,​13522-13588,​14645-14667,​14810-14812,​15066-15093,​15582-15586,​15668-15672,​15870-15875,​15975-16020,​16037-16042,​16072-16076,​16107-16111,​16121-16126,​16129-16149,​16793-16798,​16922-17001,​17124-17138,​17380-17395,​17480-17592,​17596-18127,​18131-18167,​18190-18207
    /branches/stable12378-12722
    /branches/ProbeMatchCollection13801-13922
    /branches/aci10844-11080,​16170-16373,​16376-16382,​16385-16424,​16427-16433
    /branches/addtest12468-12472,​13123-13260,​13523-13551,​13570,​13650-13653,​14319-14326,​16193-16316,​17040-17044
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    /branches/fixres13270-13326,​15127-15175
    /branches/fixwarn14815-14832
    /branches/flags15098-15222,​15225-15287
    /branches/fts17653-18088,​18090-18094,​18177-18185
    /branches/gcc12076-12079,​12995-13018,​16578-16652,​16655-16765,​16965-16985,​17164-17177,​17850-17876
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    /branches/gui17754-18092
    /branches/help10647-10841
    /branches/helptest10585-10720
    /branches/homebrew14911-14933
    /branches/io16436-16563
    /branches/keys15591-15690,​15706-15730
    /branches/macros9677-9841,​11761-11777,​11780-11797,​16484-16507
    /branches/macros29840-10082
    /branches/markers13954-14024,​14027-14196
    /branches/merge9691-9796
    /branches/mix17631-17633,​17637-17640
    /branches/mladd15377-15391,​15394-15424
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    /branches/treeTests11198-11335
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