Opened 2 months ago

Closed 3 days ago

#869 closed defect (fixed)

macros starting sina continue with next command before aligner finishes

Reported by: westram Owned by: westram
Priority: major Milestone:
Component: Library (DB) Version: SVN
Keywords: Cc:

Description

Currently SINA is called asynchronously, and the ARB interface may be used while aligning.

This causes wrong behavior, when sina is used in a macro. During record the user normally waits until sina has aligned data and then continues to e.g. calculate some trees.

During playback the tree calculation will start directly after starting the (async) aligner, i.e. will (unexpectedly) use the unaligned sequences.

Todo:

  • call sina synchronously if possible.

Similar problems might also show up here:

  • Compute clusters of correlated positions (arb_rnacma)
  • Design Sequencing Primers

Change History (2)

comment:1 Changed 8 weeks ago by westram

  • Owner changed from devel to westram
  • Status changed from new to _started

comment:2 Changed 3 days ago by westram

  • Resolution set to fixed
  • Status changed from _started to closed

by [19549].

Also synchronize all GDE actions to enforce macro compatibility.

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