Opened 10 years ago

Last modified 9 years ago

#100 new defect

Sec_Edit shows no structure when alignment was expanded

Reported by: fog Owned by: westram
Priority: major Milestone:
Component: ARB_SECEDIT Version: SVN
Keywords: Cc:

Description

When expanding the alignment e.g. in the 16S SSU Ref dataset e.g. at the end with 5000 positions Sec_Edit shows an error message insted of the Secondary structure - see attachment

Attachments (2)

Sec_edit_error.jpeg (72.8 KB) - added by fog 10 years ago.
bt_sec_edit (2.6 KB) - added by meierh 9 years ago.

Download all attachments as: .zip

Change History (6)

Changed 10 years ago by fog

Changed 9 years ago by meierh

comment:1 Changed 9 years ago by meierh

  • Owner changed from devel to meierh
  • Status changed from new to assigned
  • Version changed from release_20071207 to CVS

SVN 5990 on Opensuse 10.3:

crashes with segfault under certain conditions (observed with SSURef_96 and SSURef_98):

Sec_edit after inserting (e.g. by 5000 columns) at alignment position 50001 crashes (Backtrace attached!)

After inserting the same number of columns at a previous alignment position, e.g. 43310, Sec_edit visualizes the secondary structure model.

comment:2 Changed 9 years ago by baderk

  • Owner changed from meierh to baderk
  • Status changed from assigned to new

Unconfirmed: could not reproduce error under Ubuntu 9.04 AMD64.

comment:3 Changed 9 years ago by westram

  • Owner changed from baderk to westram
  • Status changed from new to assigned
  • related to #159
  • dont fix for upcoming release

comment:4 Changed 9 years ago by westram

  • Status changed from assigned to new
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