Opened 9 years ago

Closed 8 years ago

Last modified 3 years ago

#681 closed enhancement (implemented)

Provide maximum-likelihood add-to-tree

Reported by: westram Owned by: westram
Priority: major Milestone: arb7.0
Component: GDE Version:
Keywords: Cc:

Description (last modified by westram)

Using raxml with 

"-f p": perform pure stepwise MP addition of new sequences to an incomplete starting tree and exit

Note:

  • existing groups will be removed from tree by raxml

see also: #190, #732

Change History (10)

comment:1 Changed 9 years ago by westram

  • Description modified (diff)

comment:2 Changed 9 years ago by westram

  • Priority changed from normal to major

comment:3 Changed 9 years ago by westram

  • Milestone changed from wishlist2016 to r16q4

comment:4 Changed 8 years ago by westram

  • Owner set to westram
  • Status changed from new to assigned

comment:5 Changed 8 years ago by westram

  • Status changed from assigned to accepted

comment:6 Changed 8 years ago by westram

  • Status changed from accepted to _started

comment:7 Changed 8 years ago by westram

  • Description modified (diff)

comment:8 in reply to: ↑ description Changed 8 years ago by westram

  • Resolution set to implemented
  • Status changed from _started to closed

by [15425].

Replying to westram:

"-f p": perform pure stepwise MP addition of new sequences to an incomplete starting tree and exit

wrong flag (not implemented). Implemented ML-add instead.

comment:9 Changed 8 years ago by westram

  • Summary changed from Provide maximum-likelyhood add-to-tree to Provide maximum-likelihood add-to-tree

comment:10 Changed 3 years ago by westram

  • Milestone changed from r16q4 to arb7.0
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