The automated arb_probe output file return values of weighted mismatch that do not consider mismatch's position

[guest]

The automated arb_probe output file return values of weighted mismatch that do not consider mismatch's position.

#!/bin/bash

PARAMS='serverid=2 matchmismatches=1'

match() { echo "Matching $1" arb_probe $PARAMS matchsequence=$1 }

match_all() { match CCTCAGTACGAA match AACCGGTTAACC match ACTGACTGGGCU match ACCTGGACTTTT }

match_all | sed -e 's∧x01∧x0a/g'

[meierh]

not observed in svn-version 5954:

• opensuse 10.3 64-bit