Opened 17 years ago

Closed 17 years ago

#105 closed defect (fixed)

raxml integration does not work

Reported by: fog Owned by: devel
Priority: normal Milestone:
Component: ARB_NTREE Version:
Keywords: Cc:

Description (last modified by westram)

Main Problems:

  • RaxMl? starts with the following error message:
    treefile.in weights RAxML_info.treefile infile intree outfile outtree treefile arb_read_tree_args; cd .. ; rmdir $$ )&
    ARB ERROR:
    arb_export_tree:     export tree to stdout       syntax: arb_export_tree TREE_NAME
    
  • the program runs with 100% CPU but never finishes?
  • if you choose a base tree you get the message
    ARB_DB_SERVER: a client died abnormally
    
    and in the yellow box:
    treefile not found
    
  • the setup box is too big and with a lower resolution most of the settings can not be done
  • tests have been perfomed with Ubuntu 7.10 and 6.06 LTS on different architectures and machines.
  • we have RAxML sucessfully running on our machines so it seems not to be a general problem with the program
  • tested with lates build from 14.02.08

Change History (1)

comment:1 Changed 17 years ago by westram

  • Description modified (diff)
  • Resolution set to fixed
  • Status changed from new to closed
  • Awful ticket layout corrected (such tickets easily get ignored)
  • raxml integration was still under development in build from 14.02.08.
    Problems should be fixed now.
  • I have no idea what to do about the big window
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