source: branches/stable/HELP_SOURCE/oldhelp

Name Size Rev Age Author Last Change
../
prompt ​ 6141   15 years westram * spellchecked all (phew)
aaali.hlp 2.1 KB ​ 17398   6 years westram * adds a help page describing intended way to work with AA alignments …
accessibility_sai.hlp 3.5 KB ​ 18639   4 years westram * document accessibility SAIs as used in SILVA databases. - link …
aci.hlp 29.7 KB ​ 18311   5 years westram * reintegrates 'saicalc' into 'trunk' - implements #730 * adds: …
acisrt.hlp 900 bytes ​ 16869   7 years westram * ACI/SRT selection button in NDS - always edited the same NDS …
ad_align.hlp 2.2 KB ​ 12754   10 years westram * reintegrates 'alilink' into 'trunk' - DRYed ali admin(s) * …
ad_extended.hlp 2.2 KB ​ 18463   5 years westram * reintegrates 'top' into 'trunk' * adds: log:branches/top@18453:18462
advice.hlp 1.1 KB ​ 14081   9 years westram * documentation - 'questions' and 'advices' (de-/re-activation) …
alignment.hlp 1.2 KB ​ 13603   10 years westram * un-"plenk"
ap_stack.hlp 1.2 KB ​ 12898   10 years westram * merge [12896] from 'pars' into 'trunk'
arb.hlp 5.0 KB ​ 14261   9 years westram * document howto copy&paste
arb.pdf.gz 315.0 KB ​ 5711   16 years westram * can show *.pdf from ARB help (done same way as *ps) * arb.ps → …
arb_commands.hlp 2.4 KB ​ 12709   10 years westram * button text expanded in [12689] - did not fit into button - …
arb_db.hlp 7.9 KB ​ 9797   12 years westram * reintegrated branch 'merge' - implements #194
arb_edit4.hlp 1.6 KB ​ 14049   9 years westram * documentation - editor-configurations vs property-configurations …
arb_envar.hlp 5.6 KB ​ 18714   3 years westram * partial merge from 'trunk' into 'stable' * adds: [18709/trunk]
arb_export.hlp 3.4 KB ​ 18092   5 years westram * full update from child 'fts' into 'trunk' - implements #562 * …
arb_export_nds.hlp 1.7 KB ​ 18480   4 years westram * mention problems with 'Space padded'-column-style in documentation.
arb_gde.hlp 593 bytes ​ 6388   15 years westram - reduced GDE doc to GDE-menus - fixed links
arb_import.hlp 4.0 KB ​ 18092   5 years westram * full update from child 'fts' into 'trunk' - implements #562 * …
arb_intro.hlp 2.0 KB ​ 18693   3 years westram * link from intro help to license. * correct copyrights in intro …
arb_merge.hlp 1.5 KB ​ 9797   12 years westram * reintegrated branch 'merge' - implements #194
arb_merge_into.hlp 660 bytes ​ 9797   12 years westram * reintegrated branch 'merge' - implements #194
arb_merge_outof.hlp 674 bytes ​ 9797   12 years westram * reintegrated branch 'merge' - implements #194
arb_merge_workflow.hlp 2.5 KB ​ 17742   6 years westram * fix unnecessary typos.
arb_ntree.hlp 5.3 KB ​ 10159   12 years westram * whitespace + formatting fixes of helpfiles touched by [10158]
arb_pars.hlp 2.5 KB ​ 15972   8 years westram * link term selected species to explaining helpfile
arb_pars_init.hlp 1.4 KB ​ 6141   15 years westram * spellchecked all (phew)
arb_secedit.hlp 883 bytes ​ 4814   17 years westram - changed default bone description
asciiprint.hlp 847 bytes ​ 2986   20 years westram fixed link note
awt_csp.hlp 2.5 KB ​ 10842   11 years westram * reintegrates 'help' into 'trunk': * adds: - …
bonds.hlp 1003 bytes ​ 13712   10 years westram * add config manager to probe match
bootstrap.hlp 1.3 KB ​ 10497   11 years westram * replaced 'consense tree' by 'consensus tree' (user-visible …
branch_analysis.hlp 6.3 KB ​ 14622   9 years westram * reintegrates 'ui' into 'trunk' - implements #656 - adds …
checkfield.hlp 2.6 KB ​ 14786   9 years westram * reintegrates 'gde' into 'trunk' - fixes #695 * adds: …
chimera_check.hlp 3.4 KB ​ 13797   10 years epruesse fix spelling of likelihood
cluster_group.hlp 2.6 KB ​ 7917   13 years westram * cluster-name suffix now configurable - show example name for …
color.hlp 2.0 KB ​ 14078   9 years westram * documentation - update help on * edit4 search patterns …
color_loadsave.hlp 1.4 KB ​ 14100   9 years westram * document colorset functions * slightly fix layout of colorset window
color_props.hlp 2.3 KB ​ 14892   9 years westram * add an "all font" selection button (implements part of #672) - …
color_props_groups.hlp 992 bytes ​ 14081   9 years westram * documentation - 'questions' and 'advices' (de-/re-activation) …
color_ranges.hlp 866 bytes ​ 15053   8 years westram * merge most WINDOW patches from 'color' into 'trunk' - …
colorize.hlp 1.1 KB ​ 14100   9 years westram * document colorset functions * slightly fix layout of colorset window
compare_taxonomy.hlp 2.7 KB ​ 17160   6 years westram * reintegrates 'group' into 'trunk' - misc. cleanup: * group …
compare_topo.hlp 1.4 KB ​ 17160   6 years westram * reintegrates 'group' into 'trunk' - misc. cleanup: * group …
concatenate.hlp 3.2 KB ​ 14121   9 years westram * update documentation related to 'gene-species' - added "Relink …
consense_algo.hlp 11.7 KB ​ 17742   6 years westram * fix unnecessary typos.
consense_tree.hlp 896 bytes ​ 10497   11 years westram * replaced 'consense tree' by 'consensus tree' (user-visible …
consensus.hlp 1.2 KB ​ 6391   15 years westram * fixed old ARB_EDIT help references - reused help for functions …
consensus_def.hlp 5.0 KB ​ 14425   9 years westram * reintegrates 'consensus' into 'trunk' - fixes #663 (consistent …
console.hlp 1.4 KB ​ 16391   7 years westram * full update from child 'aci' into 'trunk' - allow to view …
copyNpaste.hlp 1.4 KB ​ 16936   7 years westram * reintegrates 'cleanup' into 'trunk' - performs #762 (shrink 3.7 …
count_chars.hlp 1.0 KB ​ 7184   14 years westram merges [7071] [7072] [7073] [7075] [7078] [7079] [7082] [7092] [7094] …
csp_2_gnuplot.hlp 2.5 KB ​ 8640   13 years westram * one awar in !ColumnStat_2_gnuplot.cxx clashed with an awar used in …
del_list.hlp 1.1 KB ​ 14088   9 years westram * documentation - fix broken help for search/info of organisms …
di_clusters.hlp 6.5 KB ​ 15972   8 years westram * link term selected species to explaining helpfile
displayField.hlp 966 bytes ​ 14093   9 years westram * SAI/PROBE match - 'Select display field' window * document …
dist.hlp 8.2 KB ​ 16760   7 years westram * document details of pairwise excluded columns in matrix calculation
dssp_ift.hlp 6.8 KB ​ 11968   11 years westram * reintegrates 'customize' into 'trunk' - implements #263 * …
e4.hlp 11.5 KB ​ 18463   5 years westram * reintegrates 'top' into 'trunk' * adds: log:branches/top@18453:18462
e4_background_priority.hlp 1.6 KB ​ 14078   9 years westram * documentation - update help on * edit4 search patterns …
e4_block.hlp 3.0 KB ​ 18311   5 years westram * reintegrates 'saicalc' into 'trunk' - implements #730 * adds: …
e4_consensus.hlp 683 bytes ​ 5712   16 years westram * New feature: insert dots where bases are potentially missing in …
e4_defaults.hlp 1.7 KB ​ 14049   9 years westram * documentation - editor-configurations vs property-configurations …
e4_get_species.hlp 2.2 KB ​ 18311   5 years westram * reintegrates 'saicalc' into 'trunk' - implements #730 * adds: …
e4_mode.hlp 1.8 KB ​ 14641   9 years westram * reintegrates 'remote' into 'trunk' - implements #52 and #362 * …
e4_modsai.hlp 1.4 KB ​ 18311   5 years westram * reintegrates 'saicalc' into 'trunk' - implements #730 * adds: …
e4_options.hlp 3.1 KB ​ 14296   9 years westram * document CTRL-keybindings available in EDIT4
e4_replace.hlp 924 bytes ​ 18311   5 years westram * reintegrates 'saicalc' into 'trunk' - implements #730 * adds: …
e4_search.hlp 4.8 KB ​ 14296   9 years westram * document CTRL-keybindings available in EDIT4
ecoliref.hlp 1.6 KB ​ 15972   8 years westram * link term selected species to explaining helpfile
ed4_flags.hlp 4.6 KB ​ 15288   8 years westram * reintegrates 'flags' into 'trunk' - implements #261 * adds: …
ed4_nds.hlp 1.7 KB ​ 10842   11 years westram * reintegrates 'help' into 'trunk': * adds: - …
exec_bug.hlp 1.2 KB ​ 13603   10 years westram * un-"plenk"
experiment_info.hlp 1.4 KB ​ 14088   9 years westram * documentation - fix broken help for search/info of organisms …
experiment_search.hlp 907 bytes ​ 14088   9 years westram * documentation - fix broken help for search/info of organisms …
export_format.hlp 2.2 KB ​ 18092   5 years westram * full update from child 'fts' into 'trunk' - implements #562 * …
export_test.hlp 1.5 KB ​ 16564   7 years westram * reintegrates 'io' into 'trunk' - implements #691 * adds: …
extended.hlp 1.3 KB ​ 6391   15 years westram * fixed old ARB_EDIT help references - reused help for functions …
faligner.hlp 6.8 KB ​ 17398   6 years westram * adds a help page describing intended way to work with AA alignments …
FAQS.hlp 923 bytes ​ 13603   10 years westram * un-"plenk"
field_sel_new.hlp 603 bytes ​ 14786   9 years westram * reintegrates 'gde' into 'trunk' - fixes #695 * adds: …
field_shader.hlp 2.1 KB ​ 15054   8 years westram * reintegrates 'color' into 'trunk' - implements #443 (+parts of …
FORM.hlp 553 bytes ​ 15054   8 years westram * reintegrates 'color' into 'trunk' - implements #443 (+parts of …
gde_flat_ift.hlp 760 bytes ​ 10159   12 years westram * whitespace + formatting fixes of helpfiles touched by [10158]
gde_menus.hlp 13.2 KB ​ 15398   8 years westram * partial merge from 'mladd' into 'trunk' - GDE fixes * adds: …
gen_create.hlp 2.1 KB ​ 7814   13 years westram merge from dev [7760] [7761] [7763] [7764] [7765] * Gene location …
gen_disp_style.hlp 742 bytes ​ 14089   9 years westram * merge 2 genemap property windows * document genemap properties, …
gen_jump.hlp 721 bytes ​ 14089   9 years westram * merge 2 genemap property windows * document genemap properties, …
gen_mode.hlp 1.1 KB ​ 14090   9 years westram * document genemap 'new view' and 'mode buttons'
gen_new_view.hlp 1.1 KB ​ 14090   9 years westram * document genemap 'new view' and 'mode buttons'
gen_options.hlp 2.2 KB ​ 14089   9 years westram * merge 2 genemap property windows * document genemap properties, …
gene_extract.hlp 1.1 KB ​ 14121   9 years westram * update documentation related to 'gene-species' - added "Relink …
gene_hide.hlp 633 bytes ​ 14089   9 years westram * merge 2 genemap property windows * document genemap properties, …
gene_info.hlp 6.9 KB ​ 14261   9 years westram * document howto copy&paste
gene_map.hlp 584 bytes ​ 2986   20 years westram fixed link note
gene_mark.hlp 739 bytes ​ 14088   9 years westram * documentation - fix broken help for search/info of organisms …
gene_mode.hlp 724 bytes ​ 8726   13 years westram * help (mouse wheel)
gene_search.hlp 1.8 KB ​ 14088   9 years westram * documentation - fix broken help for search/info of organisms …
gene_species.hlp 1.6 KB ​ 14121   9 years westram * update documentation related to 'gene-species' - added "Relink …
gene_species_field_transfer.hlp 2.0 KB ​ 9797   12 years westram * reintegrated branch 'merge' - implements #194
gene_species_mark.hlp 877 bytes ​ 14088   9 years westram * documentation - fix broken help for search/info of organisms …
genes.hlp 1.2 KB ​ 13603   10 years westram * un-"plenk"
glossary.hlp 3.0 KB ​ 15971   8 years westram * update documentation concerning the "selected species" - remove …
group_by_field.hlp 1.5 KB ​ 15974   8 years westram * solve remaining confusion in terminology (concerning "selected …
group_rename.hlp 3.0 KB ​ 16374   7 years westram * reintegrates 'aci' into 'trunk' - refactored wide parts of ACI …
group_search.hlp 11.9 KB ​ 17110   7 years westram * reintegrates 'tree' into 'trunk' - implements #735 * adds: …
group_trees.hlp 694 bytes ​ 15966   8 years westram * reintegrates 'group' into 'trunk' - implements #652 (group …
helix.hlp 3.2 KB ​ 8629   13 years westram merge from e4fix [8428] [8429] [8605] * insert/delete now works …
helixsym.hlp 1.4 KB ​ 8629   13 years westram merge from e4fix [8428] [8429] [8605] * insert/delete now works …
help.hlp 4.6 KB ​ 17336   6 years westram * typos - some had two good language skills ;-) - fix some …
import_test.hlp 1.3 KB ​ 16564   7 years westram * reintegrates 'io' into 'trunk' - implements #691 * adds: …
importift.hlp 7.3 KB ​ 16564   7 years westram * reintegrates 'io' into 'trunk' - implements #691 * adds: …
input_mask.hlp 1017 bytes ​ 2986   20 years westram fixed link note
input_mask_format.hlp 6.6 KB ​ 8696   13 years westram * merge from saiali log:branches/saiali@8635-8695 - unalign center …
input_mask_new.hlp 1.6 KB ​ 11069   11 years westram * '~/.arb_prop' replaced by environmentvariable ARB_PROP - …
insdel.hlp 922 bytes ​ 14644   9 years westram - german todo-comments existed since file has been added to VC * no …
insdel_sai.hlp 2.9 KB ​ 13698   10 years westram * filled empty help for 'Insert delete/using SAI'
islandhopping.hlp 677 bytes ​ 13725   10 years westram * add config manager to integrated aligners
iupac-codes.hlp 714 bytes ​ 17078   7 years westram * DRY duplicated description of primer search parameters * tested …
keeled_groups.hlp 4.0 KB ​ 18686   3 years westram * change references to (never released) arb-6.1 → arb-7.0
kernlin.hlp 3.2 KB ​ 13666   10 years westram - doc menu entry changed with [13657]
macro.hlp 6.6 KB ​ 18446   5 years westram * document key bindings for paging. * show howto handle undefined …
Makefile 188 bytes ​ 387   23 years westram help files prepared for hlp→xml→html conversion
man_arb_edit4.hlp 2.4 KB ​ 8726   13 years westram * help (mouse wheel)
manage_test.hlp 1.1 KB ​ 16564   7 years westram * reintegrates 'io' into 'trunk' - implements #691 * adds: …
manual.hlp 361 bytes ​ 5775   16 years westram * made help generator bit more robust - local link types are no …
mark.hlp 1.6 KB ​ 14049   9 years westram * documentation - editor-configurations vs property-configurations …
mark_duplicates.hlp 689 bytes ​ 12884   10 years westram * implements #22 ("expand zombies") - DRYed NT- and …
mark_genes.hlp 1.0 KB ​ 14088   9 years westram * documentation - fix broken help for search/info of organisms …
mark_list.hlp 756 bytes ​ 14088   9 years westram * documentation - fix broken help for search/info of organisms …
markbyref.hlp 2.3 KB ​ 15972   8 years westram * link term selected species to explaining helpfile
matrix_settings.hlp 981 bytes ​ 7632   14 years westram * ARB_DIST - use ints in DI_dmatrix - matrix allows much …
max_freq.hlp 2.6 KB ​ 14425   9 years westram * reintegrates 'consensus' into 'trunk' - fixes #663 (consistent …
merge_species.hlp 2.8 KB ​ 14082   9 years westram * merge species / concat alignments - fix help-links in …
mergetaggedfield.hlp 2.4 KB ​ 14786   9 years westram * reintegrates 'gde' into 'trunk' - fixes #695 * adds: …
mg_alignment.hlp 1.2 KB ​ 9797   12 years westram * reintegrated branch 'merge' - implements #194
mg_extendeds.hlp 1.1 KB ​ 9797   12 years westram * reintegrated branch 'merge' - implements #194
mg_names.hlp 2.6 KB ​ 18649   4 years westram * link help (namesadmin → merge check ids)
mg_preserve.hlp 2.6 KB ​ 6141   15 years westram * spellchecked all (phew)
mg_species.hlp 6.9 KB ​ 18359   5 years westram * add new FTS transfer mode to merge-tool (implements #825) - …
mg_species_configs.hlp 1.2 KB ​ 14256   9 years westram * reintegrates 'config' into 'trunk' (implements #607) * adds: …
mg_trees.hlp 1.4 KB ​ 9797   12 years westram * reintegrated branch 'merge' - implements #194
mg_xfer_field_of_listed.hlp 1.3 KB ​ 18092   5 years westram * full update from child 'fts' into 'trunk' - implements #562 * …
mg_xfer_field_of_sel.hlp 805 bytes ​ 18092   5 years westram * full update from child 'fts' into 'trunk' - implements #562 * …
missbase.hlp 1.2 KB ​ 5723   16 years westram * do not apply insertDots to ACGTU only, instead apply to all upper …
mod_field_list.hlp 5.0 KB ​ 18662   3 years westram * add toggle to 'MODIFY DATABASE FIELD of listed …' permitting to …
mode.hlp 1.8 KB ​ 11143   11 years westram * unified names of mode-pixmaps and -helpfiles * renamed modes …
mode_group.hlp 2.5 KB ​ 17110   7 years westram * reintegrates 'tree' into 'trunk' - implements #735 * adds: …
mode_info.hlp 1.8 KB ​ 14641   9 years westram * reintegrates 'remote' into 'trunk' - implements #52 and #362 * …
mode_kernlin.hlp 673 bytes ​ 13625   10 years westram * reintegrates 'pars' into 'trunk' - fixes #528, #609, #620, #631, …
mode_length.hlp 2.4 KB ​ 11488   11 years westram * reintegrates 'tree' into 'trunk' - implements #417 (multifurcate …
mode_lzoom.hlp 1.5 KB ​ 11488   11 years westram * reintegrates 'tree' into 'trunk' - implements #417 (multifurcate …
mode_mark.hlp 1.2 KB ​ 11488   11 years westram * reintegrates 'tree' into 'trunk' - implements #417 (multifurcate …
mode_move.hlp 2.5 KB ​ 17110   7 years westram * reintegrates 'tree' into 'trunk' - implements #735 * adds: …
mode_nni.hlp 634 bytes ​ 13625   10 years westram * reintegrates 'pars' into 'trunk' - fixes #528, #609, #620, #631, …
mode_optimize.hlp 1.0 KB ​ 13625   10 years westram * reintegrates 'pars' into 'trunk' - fixes #528, #609, #620, #631, …
mode_pzoom.hlp 1.7 KB ​ 11488   11 years westram * reintegrates 'tree' into 'trunk' - implements #417 (multifurcate …
mode_rotate.hlp 1.0 KB ​ 11488   11 years westram * reintegrates 'tree' into 'trunk' - implements #417 (multifurcate …
mode_select.hlp 726 bytes ​ 11488   11 years westram * reintegrates 'tree' into 'trunk' - implements #417 (multifurcate …
mode_setroot.hlp 1.3 KB ​ 18634   4 years westram * reintegrates 'root' into 'trunk' - implements #449 * adds: …
mode_spread.hlp 1.2 KB ​ 11488   11 years westram * reintegrates 'tree' into 'trunk' - implements #417 (multifurcate …
mode_swap.hlp 1.2 KB ​ 11488   11 years westram * reintegrates 'tree' into 'trunk' - implements #417 (multifurcate …
mode_width.hlp 1.5 KB ​ 11488   11 years westram * reintegrates 'tree' into 'trunk' - implements #417 (multifurcate …
mode_www.hlp 611 bytes ​ 2986   20 years westram fixed link note
move_groups.hlp 8.5 KB ​ 17353   6 years westram * more details for example
mp_params.hlp 1.2 KB ​ 13603   10 years westram * un-"plenk"
multifurcate.hlp 4.3 KB ​ 14121   9 years westram * update documentation related to 'gene-species' - added "Relink …
multiprobe.hlp 4.3 KB ​ 13873   10 years westram * add 6 more probe colors (rainbow colors) * update color names …
multiproberesults.hlp 1.3 KB ​ 13873   10 years westram * add 6 more probe colors (rainbow colors) * update color names …
namesadmin.hlp 4.0 KB ​ 18652   4 years westram * fix nameserver admin layout: - status field now colored and …
ne_align_seq.hlp 1.6 KB ​ 6391   15 years westram * fixed old ARB_EDIT help references - reused help for functions …
nekey_map.hlp 1.0 KB ​ 13753   10 years westram * edit4 key mappings - added config manager - use 2-column …
newwindow.hlp 1.4 KB ​ 15340   8 years westram * reintegrates 'sync' into 'trunk' - implements #683 * adds: …
next_neighbours.hlp 2.4 KB ​ 15972   8 years westram * link term selected species to explaining helpfile
next_neighbours_common.hlp 7.5 KB ​ 10594   11 years westram * help unittest - at start: change to directory HELP_SOURCE - …
next_neighbours_listed.hlp 2.1 KB ​ 18149   5 years westram * document howto "transport" IDs stored in fields to a new nameserver.
nni.hlp 1.5 KB ​ 13625   10 years westram * reintegrates 'pars' into 'trunk' - fixes #528, #609, #620, #631, …
no_tree.hlp 2.4 KB ​ 11401   11 years westram * reintegrates 'tree' into 'trunk': - consensus trees: * …
nt_align_select.hlp 886 bytes ​ 6141   15 years westram * spellchecked all (phew)
nt_keys.hlp 3.8 KB ​ 15973   8 years westram * minor changes
nt_tree_marker_settings.hlp 1.5 KB ​ 14049   9 years westram * documentation - editor-configurations vs property-configurations …
nt_tree_select.hlp 1.0 KB ​ 2986   20 years westram fixed link note
nt_tree_settings.hlp 3.9 KB ​ 15972   8 years westram * link term selected species to explaining helpfile
nt_tree_settings_bootstrap.hlp 3.8 KB ​ 18637   4 years westram * hide bootstrap values at zero-length branches. - correct …
nt_tree_settings_expert.hlp 3.2 KB ​ 15374   8 years westram * reintegrates 'tree' into 'trunk' - implements #578 - tree …
optimize.hlp 1.4 KB ​ 12709   10 years westram * button text expanded in [12689] - did not fit into button - …
organism_mark.hlp 778 bytes ​ 2986   20 years westram fixed link note
organisms.hlp 1.1 KB ​ 2986   20 years westram fixed link note
pa_add.hlp 1.6 KB ​ 13625   10 years westram * reintegrates 'pars' into 'trunk' - fixes #528, #609, #620, #631, …
pa_bootstrap.hlp 1.9 KB ​ 14408   9 years westram * remove some dead mail-addresses [Note: test commit from DAV-WC to …
pa_branchlengths.hlp 2.7 KB ​ 13625   10 years westram * reintegrates 'pars' into 'trunk' - fixes #528, #609, #620, #631, …
pa_globopti.hlp 1.0 KB ​ 13625   10 years westram * reintegrates 'pars' into 'trunk' - fixes #528, #609, #620, #631, …
pa_kernlin.hlp 1.7 KB ​ 13625   10 years westram * reintegrates 'pars' into 'trunk' - fixes #528, #609, #620, #631, …
pa_locopti.hlp 1.4 KB ​ 13625   10 years westram * reintegrates 'pars' into 'trunk' - fixes #528, #609, #620, #631, …
pa_mixtree.hlp 1.4 KB ​ 13625   10 years westram * reintegrates 'pars' into 'trunk' - fixes #528, #609, #620, #631, …
pa_optimizer.hlp 2.3 KB ​ 18686   3 years westram * change references to (never released) arb-6.1 → arb-7.0
pa_partial.hlp 2.9 KB ​ 13625   10 years westram * reintegrates 'pars' into 'trunk' - fixes #528, #609, #620, #631, …
pa_quick.hlp 4.4 KB ​ 18686   3 years westram * change references to (never released) arb-6.1 → arb-7.0
pa_reset.hlp 1.2 KB ​ 13625   10 years westram * reintegrates 'pars' into 'trunk' - fixes #528, #609, #620, #631, …
pa_value.hlp 6.7 KB ​ 13625   10 years westram * reintegrates 'pars' into 'trunk' - fixes #528, #609, #620, #631, …
pars.hlp 2.0 KB ​ 15459   8 years westram * reintegrates 'pars' into 'trunk' - performs #643 * adds: …
partial_sequences.hlp 1.8 KB ​ 13625   10 years westram * reintegrates 'pars' into 'trunk' - fixes #528, #609, #620, #631, …
pd_match_iupac.hlp 986 bytes ​ 14123   9 years westram * merge [14030] + [14032] from 'markers' into 'trunk'
pd_spec_param.hlp 1.2 KB ​ 7987   13 years westram * support new probe match params introduced in [7986] from ARB_NT …
pfold.hlp 4.1 KB ​ 13604   10 years westram * minor help fixes
pfold_props.hlp 4.8 KB ​ 6141   15 years westram * spellchecked all (phew)
pfold_sai.hlp 1.4 KB ​ 15972   8 years westram * link term selected species to explaining helpfile
ph_export_markerline.hlp 490 bytes ​ 2986   20 years westram fixed link note
phyl.hlp 6.1 KB ​ 18311   5 years westram * reintegrates 'saicalc' into 'trunk' - implements #730 * adds: …
phylo.hlp 4.8 KB ​ 18259   5 years westram - document the scope upon which ARB_PHYLO will operate.
pm_spec_param.hlp 1.5 KB ​ 18222   5 years westram * typo in documentation * improve CLI help for arb_probe_match
pos_var_pars.hlp 4.8 KB ​ 17100   7 years westram * document valid characters for PVP
primer.hlp 985 bytes ​ 10842   11 years westram * reintegrates 'help' into 'trunk': * adds: - …
primer_new.hlp 3.7 KB ​ 17078   7 years westram * DRY duplicated description of primer search parameters * tested …
primer_result.hlp 859 bytes ​ 14122   9 years westram * document primer design result window
probe_param.hlp 3.9 KB ​ 14042   9 years westram * merge [14031] from 'markers' into 'trunk'
probeadmin.hlp 2.2 KB ​ 16391   7 years westram * full update from child 'aci' into 'trunk' - allow to view …
probedesign.hlp 1.7 KB ​ 14042   9 years westram * merge [14031] from 'markers' into 'trunk'
probedesignresult.hlp 3.1 KB ​ 17370   6 years westram * checked quality calculation (probe design): - document more …
probematch.hlp 4.4 KB ​ 14261   9 years westram * document howto copy&paste
probespec.hlp 6.8 KB ​ 14197   9 years westram * reintegrates 'markers' into 'trunk' - completes #658 * adds: …
prop_configs.hlp 2.2 KB ​ 15966   8 years westram * reintegrates 'group' into 'trunk' - implements #652 (group …
prop_configs_edit.hlp 2.2 KB ​ 17336   6 years westram * typos - some had two good language skills ;-) - fix some …
props_frame.hlp 1.2 KB ​ 14081   9 years westram * documentation - 'questions' and 'advices' (de-/re-activation) …
props_nds.hlp 5.6 KB ​ 16868   7 years westram * updated NDS help. document behavior - in case of missing field …
props_www.hlp 2.0 KB ​ 16374   7 years westram * reintegrates 'aci' into 'trunk' - refactored wide parts of ACI …
Protection.hlp 954 bytes ​ 6192   15 years westram * updated
proteinViewer.hlp 2.9 KB ​ 17593   6 years westram * reintegrates 'fix' into 'trunk' - performs #798 * adds …
pt_server.hlp 5.4 KB ​ 13603   10 years westram * un-"plenk"
questions.hlp 1.3 KB ​ 14081   9 years westram * documentation - 'questions' and 'advices' (de-/re-activation) …
quit.hlp 679 bytes ​ 2986   20 years westram fixed link note
realign_dna.hlp 3.3 KB ​ 17398   6 years westram * adds a help page describing intended way to work with AA alignments …
reg.hlp 7.2 KB ​ 18642   4 years westram * tweak replacement via regular expressions: - allow replacement …
rename.hlp 967 bytes ​ 18651   4 years westram * add 'configure' button to 'synchronize ids' - refactored …
rerepair.hlp 1.8 KB ​ 14125   9 years westram * document 'Re-repair DB'
reset_win_layout.hlp 684 bytes ​ 14081   9 years westram * documentation - 'questions' and 'advices' (de-/re-activation) …
resortbyother.hlp 1.5 KB ​ 12021   11 years westram * extend help for 'Sort tree by other tree'
resorttree.hlp 1.7 KB ​ 13625   10 years westram * reintegrates 'pars' into 'trunk' - fixes #528, #609, #620, #631, …
rna3d_changeMolecule.hlp 539 bytes ​ 14091   9 years westram * RNA3D - help-link buttons in main window - remove unfinished …
rna3d_dispBases.hlp 2.5 KB ​ 6133   15 years westram * reformatted overlong lines in helpfiles
rna3d_dispHelices.hlp 2.7 KB ​ 6141   15 years westram * spellchecked all (phew)
rna3d_dispMolecule.hlp 2.9 KB ​ 14091   9 years westram * RNA3D - help-link buttons in main window - remove unfinished …
rna3d_general.hlp 2.0 KB ​ 6141   15 years westram * spellchecked all (phew)
rna3d_manual.pdf.gz 259.9 KB ​ 5711   16 years westram * can show *.pdf from ARB help (done same way as *ps) * arb.ps → …
rna3d_mapSeqData.hlp 6.6 KB ​ 6141   15 years westram * spellchecked all (phew)
rst_log_zoom.hlp 880 bytes ​ 2986   20 years westram fixed link note
rst_phys_zoom.hlp 803 bytes ​ 8726   13 years westram * help (mouse wheel)
saicalc.hlp 9.2 KB ​ 18311   5 years westram * reintegrates 'saicalc' into 'trunk' - implements #730 * adds: …
saiProbe.hlp 2.0 KB ​ 18639   4 years westram * document accessibility SAIs as used in SILVA databases. - link …
save.hlp 4.4 KB ​ 14641   9 years westram * reintegrates 'remote' into 'trunk' - implements #52 and #362 * …
save_matrix.hlp 1.1 KB ​ 10159   12 years westram * whitespace + formatting fixes of helpfiles touched by [10158]
savedef.hlp 1.9 KB ​ 14081   9 years westram * documentation - 'questions' and 'advices' (de-/re-activation) …
scandb.hlp 1.2 KB ​ 14088   9 years westram * documentation - fix broken help for search/info of organisms …
search_duplicates.hlp 1.4 KB ​ 18602   4 years westram * advice howto mark first occurrences (of found duplicates)
search_equal_fields.hlp 2.3 KB ​ 10842   11 years westram * reintegrates 'help' into 'trunk': * adds: - …
searching.hlp 8.8 KB ​ 16799   7 years westram * reintegrates 'fix' into 'trunk' - implements #773 - tested …
sec_bonddef.hlp 1.2 KB ​ 14131   9 years westram * ARB_SECEDIT - add help for bond layout definitions - use …
sec_display.hlp 2.9 KB ​ 16564   7 years westram * reintegrates 'io' into 'trunk' - implements #691 * adds: …
sec_imexport.hlp 861 bytes ​ 14130   9 years westram * ARB_SECEDIT help for load/save structure * fix crash (if trying to …
sec_keys.hlp 1.4 KB ​ 4816   17 years westram - secedit keyboard shortcuts
sec_main.hlp 847 bytes ​ 4817   17 years westram * empty log message *
sec_mode.hlp 2.1 KB ​ 8726   13 years westram * help (mouse wheel)
sec_props.hlp 642 bytes ​ 6187   15 years westram * resource checker checks for help file references as well
secedit_imexport.hlp 747 bytes ​ 2986   20 years westram fixed link note
security.hlp 1.1 KB ​ 6391   15 years westram * fixed old ARB_EDIT help references - reused help for functions …
sel_box.hlp 1.1 KB ​ 14042   9 years westram * merge [14031] from 'markers' into 'trunk'
sel_fil.hlp 2.4 KB ​ 14088   9 years westram * documentation - fix broken help for search/info of organisms …
selected.hlp 3.6 KB ​ 15971   8 years westram * update documentation concerning the "selected species" - remove …
selected_gene.hlp 873 bytes ​ 14088   9 years westram * documentation - fix broken help for search/info of organisms …
seq_quality.hlp 3.2 KB ​ 10842   11 years westram * reintegrates 'help' into 'trunk': * adds: - …
sequence_colors.hlp 2.4 KB ​ 8621   13 years westram merge from e4fix [8340] [8341] [8342] [8343] [8344] [8345] [8346] …
set_color_of_listed.hlp 1.1 KB ​ 14088   9 years westram * documentation - fix broken help for search/info of organisms …
set_protection.hlp 1.1 KB ​ 2986   20 years westram fixed link note
sina_main.hlp 5.5 KB ​ 8607   13 years westram merge from e4fix [8135] [8136] [8137] [8138] [8139] [8140] [8141] …
sp_count_mrk.hlp 605 bytes ​ 2986   20 years westram fixed link note
sp_del_mrkd.hlp 799 bytes ​ 2986   20 years westram fixed link note
sp_IDs.hlp 5.2 KB ​ 18652   4 years westram * fix nameserver admin layout: - status field now colored and …
sp_info.hlp 5.5 KB ​ 18473   4 years westram * support genebank entry "DBLINK" - store in arb field 'db_xref'.
sp_info_locked.hlp 1.3 KB ​ 15982   8 years westram * full update from child 'fix' into 'trunk' - fixes #478 * adds: …
sp_mark.hlp 2.0 KB ​ 12302   11 years westram * help updates - merged multiple help files referring to …
sp_search.hlp 2.8 KB ​ 15971   8 years westram * update documentation concerning the "selected species" - remove …
sp_sort_fld.hlp 1.4 KB ​ 14420   9 years westram - fix OCCURRENCEs
sp_sort_phyl.hlp 814 bytes ​ 14420   9 years westram - fix OCCURRENCEs
sp_sp_2_ext.hlp 804 bytes ​ 14088   9 years westram * documentation - fix broken help for search/info of organisms …
spa_copy.hlp 1.3 KB ​ 15094   8 years westram * reintegrates 'fix' into 'trunk' * adds: …
spa_create.hlp 810 bytes ​ 16508   7 years westram * reintegrates 'macros' into 'trunk' - introduce generic input …
spa_delete.hlp 916 bytes ​ 14088   9 years westram * documentation - fix broken help for search/info of organisms …
spa_rename.hlp 1.9 KB ​ 15094   8 years westram * reintegrates 'fix' into 'trunk' * adds: …
spaf_convert.hlp 1.4 KB ​ 5939   16 years westram * moved non-GUI parts from AWT/AWT_changekey.cxx to …
spaf_create.hlp 833 bytes ​ 14088   9 years westram * documentation - fix broken help for search/info of organisms …
spaf_delete.hlp 1010 bytes ​ 14088   9 years westram * documentation - fix broken help for search/info of organisms …
spaf_reorder.hlp 1.5 KB ​ 14088   9 years westram * documentation - fix broken help for search/info of organisms …
species.hlp 1.5 KB ​ 13603   10 years westram * un-"plenk"
species_configs.hlp 2.9 KB ​ 15973   8 years westram * minor changes
species_configs_highlight.hlp 1.5 KB ​ 14197   9 years westram * reintegrates 'markers' into 'trunk' - completes #658 * adds: …
species_configs_saveload.hlp 2.8 KB ​ 18463   5 years westram * reintegrates 'top' into 'trunk' * adds: log:branches/top@18453:18462
species_join.hlp 2.1 KB ​ 14082   9 years westram * merge species / concat alignments - fix help-links in …
srt.hlp 3.6 KB ​ 16374   7 years westram * reintegrates 'aci' into 'trunk' - refactored wide parts of ACI …
st_ml.hlp 2.9 KB ​ 14078   9 years westram * documentation - update help on * edit4 search patterns …
submission.hlp 1.9 KB ​ 10159   12 years westram * whitespace + formatting fixes of helpfiles touched by [10158]
sync_colors.hlp 647 bytes ​ 14129   9 years westram * add missing help for sync-colors from ARB_SECEDIT
syncroots.hlp 2.4 KB ​ 18634   4 years westram * reintegrates 'root' into 'trunk' - implements #449 * adds: …
syncscroll.hlp 3.0 KB ​ 15340   8 years westram * reintegrates 'sync' into 'trunk' - implements #683 * adds: …
tags.hlp 1.7 KB ​ 14128   9 years westram * add missing help to merge tool (field transfer/merge; tagging) * …
tbl_boot2len.hlp 1019 bytes ​ 3917   20 years westram - fixed calculation description
tbl_justify.hlp 678 bytes ​ 2762   21 years westram - help for 'Justify branchlengths'
tbl_reset.hlp 574 bytes ​ 2763   21 years westram - help for 'Reset branchlengths'
tbl_scale.hlp 929 bytes ​ 6141   15 years westram * spellchecked all (phew)
ted_boot.hlp 754 bytes ​ 18643   4 years westram * allow to 'edit bootstraps' - document example. - when a …
tkeep_mrkd.hlp 652 bytes ​ 13604   10 years westram * minor help fixes
toggle_secinfo.hlp 830 bytes ​ 8629   13 years westram merge from e4fix [8428] [8429] [8605] * insert/delete now works …
topology_shader.hlp 3.0 KB ​ 15054   8 years westram * reintegrates 'color' into 'trunk' - implements #443 (+parts of …
tr_export.hlp 3.3 KB ​ 17110   7 years westram * reintegrates 'tree' into 'trunk' - implements #735 * adds: …
tr_import.hlp 2.1 KB ​ 14589   9 years westram * 'Tree admin' - updated documentation - link correct help …
tr_jump.hlp 832 bytes ​ 15972   8 years westram * link term selected species to explaining helpfile
tr_type_irs.hlp 955 bytes ​ 6141   15 years westram * spellchecked all (phew)
tr_type_list.hlp 812 bytes ​ 2986   20 years westram fixed link note
tr_type_nds.hlp 1.0 KB ​ 2986   20 years westram fixed link note
tr_type_radial.hlp 914 bytes ​ 2986   20 years westram fixed link note
track_ali_changes.hlp 1.2 KB ​ 4673   18 years westram - sequence/alignment change tracker
trans_anal.hlp 834 bytes ​ 6141   15 years westram * spellchecked all (phew)
transl_table.hlp 1.5 KB ​ 17593   6 years westram * reintegrates 'fix' into 'trunk' - performs #798 * adds …
translate_dna_2_pro.hlp 3.8 KB ​ 17593   6 years westram * reintegrates 'fix' into 'trunk' - performs #798 * adds …
tree2file.hlp 1.7 KB ​ 14131   9 years westram * ARB_SECEDIT - add help for bond layout definitions - use …
tree2prt.hlp 6.5 KB ​ 7668   14 years westram * merge from dev [7578] [7579] [7580] [7581] [7582] [7585] [7587] …
tree_group.hlp 1.7 KB ​ 14078   9 years westram * documentation - update help on * edit4 search patterns …
tree_pseudo.hlp 785 bytes ​ 14121   9 years westram * update documentation related to 'gene-species' - added "Relink …
tree_shading.hlp 3.8 KB ​ 15054   8 years westram * reintegrates 'color' into 'trunk' - implements #443 (+parts of …
treeadm.hlp 2.9 KB ​ 17160   6 years westram * reintegrates 'group' into 'trunk' - misc. cleanup: * group …
trees.hlp 1.1 KB ​ 2986   20 years westram fixed link note
trm_boot.hlp 767 bytes ​ 18643   4 years westram * allow to 'edit bootstraps' - document example. - when a …
trm_del.hlp 1.0 KB ​ 14088   9 years westram * documentation - fix broken help for search/info of organisms …
trm_mrkd.hlp 531 bytes ​ 2986   20 years westram fixed link note
undo.hlp 1.6 KB ​ 14078   9 years westram * documentation - update help on * edit4 search patterns …
unittest.hlp 7.4 KB ​ 10842   11 years westram * reintegrates 'help' into 'trunk': * adds: - …
universal_ift.hlp 1.3 KB ​ 10159   12 years westram * whitespace + formatting fixes of helpfiles touched by [10158]
unmark_list.hlp 710 bytes ​ 14088   9 years westram * documentation - fix broken help for search/info of organisms …
user_matrix.hlp 1014 bytes ​ 13604   10 years westram * minor help fixes
version.hlp 3.3 KB ​ 10096   12 years westram * updated version information * changelog - updated missing …
viewdiff.hlp 2.2 KB ​ 14425   9 years westram * reintegrates 'consensus' into 'trunk' - fixes #663 (consistent …
visualizeSAI.hlp 3.4 KB ​ 18639   4 years westram * document accessibility SAIs as used in SILVA databases. - link …
vn_delete.hlp 774 bytes ​ 10159   12 years westram * whitespace + formatting fixes of helpfiles touched by [10158]
vn_import.hlp 1.2 KB ​ 4229   18 years westram - List of Validly Published Bacterial Names (upgraded and renamed)
vn_search.hlp 1.1 KB ​ 15972   8 years westram * link term selected species to explaining helpfile
vn_suggest.hlp 1.1 KB ​ 6141   15 years westram * spellchecked all (phew)
write_field_list.hlp 2.4 KB ​ 14786   9 years westram * reintegrates 'gde' into 'trunk' - fixes #695 * adds: …
xferset.hlp 5.9 KB ​ 18092   5 years westram * full update from child 'fts' into 'trunk' - implements #562 * …
xterm.hlp 1.5 KB ​ 16391   7 years westram * full update from child 'aci' into 'trunk' - allow to view …
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